RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF319Q9P2F9 582 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PSMB8P28062 276 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 HAPLN4Q86UW8 402 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 Q8NFD4 153 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 RPL39P5Q59GN2 51 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 SIGLEC15Q6ZMC9 328 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 Q6ZNB5 142 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 Q6ZS52 159 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 C8orf86Q6ZUL3 223 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 Q6ZUT4 128 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 VSIG2Q96IQ7 327 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 CFHR2P36980 270 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PRB3Q04118 309 aaPredicted RBP5.11□□□□□ -1.59
VCAN-203ENST00000343200 ZNF493Q6ZR52 646 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PATE1Q8WXA2 126 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 PILRAQ9UKJ1 303 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 DAD1P61803 113 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 NMSQ5H8A3 153 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 SPINK14Q6IE38 97 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 DEFB125Q8N687 156 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 RNASE8Q8TDE3 154 aaKnown RBP5.11□□□□□ -1.59
VCAN-203ENST00000343200 PROB1E7EW31 1015 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 IGKV3-20P01619 116 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 BMPERQ8N8U9 685 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 TRAV40A0A0B4J280 105 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 NDUFA7O95182 113 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 GAS1P54826 345 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 SRSF2Q01130 221 aaKnown RBP5.11□□□□□ -1.59
VCAN-203ENST00000343200 DEPPQ9NTK1 212 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 A0A0B4J2C4 111 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 K7EMI3 77 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 LPAL2Q16609 132 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 TMEM54Q969K7 222 aa5.11□□□□□ -1.59
VCAN-203ENST00000343200 FOXC1Q12948 553 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 FAM90A1Q86YD7 464 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 LINC01555Q8NAE3 123 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 CTHRC1Q96CG8 243 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 RASL10BQ96S79 203 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 TRGV8A0A0C4DH27 118 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 RHODO00212 210 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 C1QCP02747 245 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 RNASE2P10153 161 aaKnown RBP5.1□□□□□ -1.59
VCAN-203ENST00000343200 C6orf226Q5I0X4 101 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 C1QTNF5Q9BXJ0 243 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 C2CD4DB7Z1M9 353 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 J3QW42 95 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 NDUFS5O43920 106 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 YPEL1O60688 119 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 SPATA31B1PQ5VZV4 182 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 THAP8Q8NA92 274 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 CHCHD5Q9BSY4 110 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 SMIM27A0A1W2PRY6 76 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 CRYGBP07316 175 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 C10orf105Q8TEF2 133 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 F8VRH5 84 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 ADCYAP1P18509 176 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 FBXL7Q9UJT9 491 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 LSM4Q9Y4Z0 139 aaKnown RBP5.1□□□□□ -1.59
VCAN-203ENST00000343200 LYPD1Q8N2G4 141 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 HS3ST6Q96QI5 342 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 RETNQ9HD89 108 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 LTBP3Q9NS15 1303 aa5.1□□□□□ -1.59
VCAN-203ENST00000343200 HECTD1Q9ULT8 2610 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 CT62P0C5K7 136 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 SRSF7Q16629 238 aaKnown RBP eCLIP5.09□□□□□ -1.59
VCAN-203ENST00000343200 ACP7Q6ZNF0 438 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 LYPD6BQ8NI32 183 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 K7ERS5 55 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 SS18Q15532 418 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 CCL13Q99616 98 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 DCTN5Q9BTE1 182 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 COL27A1Q8IZC6 1860 aaPredicted RBP5.09□□□□□ -1.59
VCAN-203ENST00000343200 A0A0A6YYD4 124 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 IFI6P09912 130 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 LGALS9BQ3B8N2 356 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 LGALS9CQ6DKI2 356 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 WFDC11Q8NEX6 87 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 UCN2Q96RP3 112 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 HGFACQ04756 655 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 PTCRAQ6ISU1 281 aaPredicted RBP5.09□□□□□ -1.59
VCAN-203ENST00000343200 ITLN2Q8WWU7 325 aaPredicted RBP5.09□□□□□ -1.59
VCAN-203ENST00000343200 PYGO2Q9BRQ0 406 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 DTX4Q9Y2E6 619 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 FAM236DA0A1B0GTK5 79 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 PROP1O75360 226 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 EFEMP2O95967 443 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 TRGV3P03979 118 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 FAM236CP0DP71 79 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 DEFB109BQ30KR1 87 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 LYZL1Q6UWQ5 148 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 CCL4L1Q8NHW4 92 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 TRGV9Q99603 122 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 C14orf132Q9NPU4 83 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.09□□□□□ -1.59
VCAN-203ENST00000343200 FOXI1Q12951 378 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms