RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RABAC1Q9UI14 185 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 LYZP61626 148 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 RIGQ13278 110 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 GAFA1Q96PS6 74 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 SCNM1Q9BWG6 230 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 FXYD7P58549 80 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 IGHV3-72A0A0B4J1Y9 119 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 FBLL1A6NHQ2 334 aaKnown RBP10.98□□□□□ -0.65
SYNE3-201ENST00000334258 FSTL3O95633 263 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 DIAPH2-AS1Q14236 149 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 HAX1O00165 279 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 ZCCHC24Q8N2G6 241 aaKnown RBP10.98□□□□□ -0.65
SYNE3-201ENST00000334258 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
SYNE3-201ENST00000334258 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 HERV-K104P63124 156 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 RUSC1-AS1Q66K80 236 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 THAP8Q8NA92 274 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 TMEM167AQ8TBQ9 72 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 C9orf118A6NHY6 69 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 IFI27P40305 119 aaPredicted RBP10.97□□□□□ -0.65
SYNE3-201ENST00000334258 NMUP48645 174 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
SYNE3-201ENST00000334258 Q86TA4 180 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 ACACBO00763 2458 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 A0A1W2PPI3 338 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 A1L4Q6 167 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 GATA3P23771 443 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 TM4SF20Q53R12 229 aa10.97□□□□□ -0.65
SYNE3-201ENST00000334258 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 CCL8P80075 99 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 MEF2CQ06413 473 aaPredicted RBP10.96□□□□□ -0.65
SYNE3-201ENST00000334258 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.65
SYNE3-201ENST00000334258 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.65
SYNE3-201ENST00000334258 GLRXP35754 106 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 CACNG7P62955 275 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 JMJD8Q96S16 334 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 GEMIN7Q9H840 131 aaKnown RBP10.96□□□□□ -0.66
SYNE3-201ENST00000334258 HIGD1AQ9Y241 93 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 ITPR1Q14643 2758 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 H3BRM9 83 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 TNFRSF1AP19438 455 aa10.96□□□□□ -0.66
SYNE3-201ENST00000334258 TSSC4Q9Y5U2 329 aaPredicted RBP10.96□□□□□ -0.66
SYNE3-201ENST00000334258 CACNA1AO00555 2505 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 GP9P14770 177 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 CENPEQ02224 2701 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 TRAV17A0A0B4J275 112 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 CNIH1O95406 144 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 LOXL1Q08397 574 aaPredicted RBP10.95□□□□□ -0.66
SYNE3-201ENST00000334258 ABHD17AQ96GS6 310 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 LINC00312Q9Y6C7 94 aa10.95□□□□□ -0.66
SYNE3-201ENST00000334258 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 WFDC3Q8IUB2 231 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 ZADH2Q8N4Q0 377 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 C8orf46Q8TAG6 207 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 JKAMPQ9P055 326 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 K7EP34 96 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 IGHV1-46P01743 117 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 RBP4P02753 201 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 NBL1P41271 181 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 PRR30Q53SZ7 412 aaPredicted RBP10.94□□□□□ -0.66
SYNE3-201ENST00000334258 CCDC144NLQ6NUI1 221 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 TRGV9Q99603 122 aa10.94□□□□□ -0.66
SYNE3-201ENST00000334258 D6R8Y8 96 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 HSD52Q0P140 79 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 UFSP1Q6NVU6 142 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 RITA1Q96K30 269 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
SYNE3-201ENST00000334258 NPIPB6E9PJ23 425 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 SMAD7O15105 426 aaKnown RBP10.92□□□□□ -0.66
SYNE3-201ENST00000334258 IGHG3P01860 377 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
SYNE3-201ENST00000334258 ZNF414Q96IQ9 312 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 CT45A10P0DMU9 189 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 FABP2P12104 132 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 PRELID3AQ96N28 172 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 CLEC3BP05452 202 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 FGF6P10767 208 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 PCP2Q8IVA1 136 aa10.92□□□□□ -0.66
SYNE3-201ENST00000334258 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 CACNA1BQ00975 2339 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 GCSHP23434 173 aa10.91□□□□□ -0.66
SYNE3-201ENST00000334258 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms