RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 LYPD1Q8N2G4 141 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 TMUB1Q9BVT8 246 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 PRSS22Q9GZN4 317 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 RPP21Q9H633 154 aaKnown RBP13.61□□□□□ -0.23
DDX28-201ENST00000332395 GNB4Q9HAV0 340 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 C19orf71A6NCJ1 209 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 DIRC3C9JPN6 131 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 ZNF414Q96IQ9 312 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 CCL19Q99731 98 aa13.61□□□□□ -0.23
DDX28-201ENST00000332395 BMPR1BO00238 502 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 P01737 135 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 KRTDAPP60985 99 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 ECSCRQ19T08 205 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 UNQ5815/PRO19632Q6UWF5 114 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 PRNTQ86SH4 94 aa13.6□□□□□ -0.23
DDX28-201ENST00000332395 FAM110DQ8TAY7 271 aaPredicted RBP13.6□□□□□ -0.23
DDX28-201ENST00000332395 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 SCGB2A1O75556 95 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 APCSP02743 223 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 CTSGP08311 255 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 SPATA45Q537H7 98 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 CT83Q5H943 113 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 TRBV6-1A0A0K0K1D8 114 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 PCP4P48539 62 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 PAX8Q06710 450 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 SLAQ13239 276 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 OR10J3Q5JRS4 329 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
DDX28-201ENST00000332395 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
DDX28-201ENST00000332395 TXN2Q99757 166 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
DDX28-201ENST00000332395 COL12A1Q99715 3063 aa13.58□□□□□ -0.23
DDX28-201ENST00000332395 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 A8MWL6 223 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 VWC2LB2RUY7 222 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 TCF21O43680 179 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 GOSR1O95249 250 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 SRIP30626 198 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 TMEM75Q8N9X5 138 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 UQCR10Q9UDW1 63 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 PDE6HQ13956 83 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.24
DDX28-201ENST00000332395 TCF24Q7RTU0 167 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 ATP5L2Q7Z4Y8 100 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 KCNS1Q96KK3 526 aa13.58□□□□□ -0.24
DDX28-201ENST00000332395 SPTAN1Q13813 2472 aaKnown RBP13.57□□□□□ -0.24
DDX28-201ENST00000332395 ABCA2Q9BZC7 2435 aa13.57□□□□□ -0.24
DDX28-201ENST00000332395 VPS13CQ709C8 3753 aa13.57□□□□□ -0.24
DDX28-201ENST00000332395 ZNF253O75346 499 aa13.57□□□□□ -0.24
DDX28-201ENST00000332395 C15orf32Q32M92 178 aa13.57□□□□□ -0.24
DDX28-201ENST00000332395 IGSF10Q6WRI0 2623 aa13.57□□□□□ -0.24
DDX28-201ENST00000332395 SH2D7A6NKC9 451 aaPredicted RBP13.56□□□□□ -0.24
DDX28-201ENST00000332395 K7EQM0 130 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 IGLC3P0DOY3 106 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 COL8A1P27658 744 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 AMTP48728 403 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 GTSF1Q8WW33 167 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 IGHV3OR16-10A0A075B7F0 116 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 A0A1B0GXF2 115 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 A0A1W2PS18 150 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 NPIPB6E9PJ23 425 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 M0R3E3 92 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 KLK9Q2XQG4 91 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 STPG4Q8N801 248 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 ZNF502Q8TBZ5 544 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 KLK9Q9UKQ9 250 aa13.56□□□□□ -0.24
DDX28-201ENST00000332395 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 GPR183P32249 361 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 CAMPP49913 170 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 RHOGP84095 191 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 PSG3Q16557 428 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 C5orf56Q8N8D9 126 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 GFRA4Q9GZZ7 299 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 AAMDCQ9H7C9 122 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 RABAC1Q9UI14 185 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 G3V318 75 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
DDX28-201ENST00000332395 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
DDX28-201ENST00000332395 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 PSG8Q9UQ74 426 aa13.55□□□□□ -0.24
DDX28-201ENST00000332395 IGHV1-69DA0A0B4J2H0 117 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 NDUFS8O00217 210 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 IGHV1-69P01742 117 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 ZC2HC1AQ96GY0 325 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 LAMTOR2Q9Y2Q5 125 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 TRAV40A0A0B4J280 105 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 IGHV3-35A0A0C4DH35 117 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 ZNF785A8K8V0 405 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 ZNF324O75467 553 aaPredicted RBP13.54□□□□□ -0.24
DDX28-201ENST00000332395 PMCHP20382 165 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 HNRNPA3P51991 378 aaKnown RBP13.54□□□□□ -0.24
DDX28-201ENST00000332395 ATP5J2P56134 94 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 CLEC2AQ6UVW9 174 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 Q6ZN92 141 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
DDX28-201ENST00000332395 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms