RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PAX2Q02962 417 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 LPAR2Q9HBW0 351 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
COL9A1-201ENST00000320755 K7EQM0 130 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 ZNF414Q96IQ9 312 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 TMEM208Q9BTX3 173 aa13.69□□□□□ -0.22
COL9A1-201ENST00000320755 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.68□□□□□ -0.22
COL9A1-201ENST00000320755 PRTN3P24158 256 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 MFAP4P55083 255 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 FBXL19-AS1Q494R0 122 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
COL9A1-201ENST00000320755 IGHV1-24A0A0C4DH33 117 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 NDUFB8O95169 186 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 LINC00614P0C842 121 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 HINT1P49773 126 aaPredicted RBP13.67□□□□□ -0.22
COL9A1-201ENST00000320755 CRIP1P50238 77 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 ZNF124Q15973 351 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 A0A1B0GUT8 65 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 LEPROTL1O95214 131 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 IGLL1P15814 213 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 ZFP36P26651 326 aaKnown RBP13.67□□□□□ -0.22
COL9A1-201ENST00000320755 PSG3Q16557 428 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 GFRA4Q9GZZ7 299 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 STPG4Q8N801 248 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 AAMDCQ9H7C9 122 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 C21orf62Q9NYP8 219 aa13.67□□□□□ -0.22
COL9A1-201ENST00000320755 IGKV2-40A0A087WW87 121 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-201ENST00000320755 SERTM2A0A1B0GWG4 89 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 NPIPB6E9PJ23 425 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 IGKV2D-40P01614 121 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-201ENST00000320755 NPBQ8NG41 125 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 PMCHL2Q9BQD1 86 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 SOX21Q9Y651 276 aaPredicted RBP13.66□□□□□ -0.22
COL9A1-201ENST00000320755 TRAV9-2A0A087WT02 112 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 NDUFA3O95167 84 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 ZNF562Q6V9R5 426 aa13.66□□□□□ -0.22
COL9A1-201ENST00000320755 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
COL9A1-201ENST00000320755 NPSP0C0P6 89 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 CT45A10P0DMU9 189 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 KLRB1Q12918 225 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 TMUB1Q9BVT8 246 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 IGLV11-55A0A075B6I3 123 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 OR4C46A6NHA9 309 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 RNF24Q9Y225 148 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
COL9A1-201ENST00000320755 WI2-2373I1.2A0A1W2PRP0 233 aa13.65□□□□□ -0.23
COL9A1-201ENST00000320755 TMEM11P17152 192 aa13.65□□□□□ -0.23
COL9A1-201ENST00000320755 TMEM75Q8N9X5 138 aa13.65□□□□□ -0.23
COL9A1-201ENST00000320755 A0A1W2PPR1 153 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 ODF3BA8MYP8 253 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 M0R1W7 72 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 HAX1O00165 279 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-201ENST00000320755 FAM120AOSQ5T036 256 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 Q6ZVH6 145 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 Q8TAT8 98 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 MSRB2Q9Y3D2 182 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 hDV102S1A0JD36 115 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 MRPS12O15235 138 aaKnown RBP13.64□□□□□ -0.23
COL9A1-201ENST00000320755 TSPOP30536 169 aa13.64□□□□□ -0.23
COL9A1-201ENST00000320755 F8W735 103 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-201ENST00000320755 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-201ENST00000320755 HLA-DMBP28068 263 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 CSN1S1P47710 185 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 C1RLQ9NZP8 487 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 LOC389332A0A1B0GUA5 103 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 FAM231BA6NCW3 169 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 RIGQ13278 110 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 ECSCRQ19T08 205 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 CELSR1Q9NYQ6 3014 aa13.63□□□□□ -0.23
COL9A1-201ENST00000320755 IGHV3OR16-13A0A075B7E8 117 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 IGHV3-74A0A0B4J1X5 117 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 SYS1-DBNDD2H3BUS1 97 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 DLEU1O43261 78 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 NDFIP1Q9BT67 221 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 GOLT1BQ9Y3E0 138 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 TMEM213A2RRL7 107 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 FAM162BQ5T6X4 162 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 CCDC144NLQ6NUI1 221 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 NEU4Q8WWR8 484 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-201ENST00000320755 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
COL9A1-201ENST00000320755 UBTD1Q9HAC8 227 aa13.62□□□□□ -0.23
COL9A1-201ENST00000320755 THYN1Q9P016 225 aa13.61□□□□□ -0.23
COL9A1-201ENST00000320755 NPIPB5A8MRT5 1133 aa13.61□□□□□ -0.23
COL9A1-201ENST00000320755 RELQ04864 619 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-201ENST00000320755 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
COL9A1-201ENST00000320755 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
COL9A1-201ENST00000320755 LYPD1Q8N2G4 141 aa13.61□□□□□ -0.23
COL9A1-201ENST00000320755 PRSS3P2Q8NHM4 247 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms