RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 C20orf204Q6ZNR8 217 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 UBE2DNLQ8IWF7 75 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 TMEM256Q8N2U0 113 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 SORL1Q92673 2214 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 PCOLCEQ15113 449 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 MRPL23Q16540 153 aaKnown RBP4.48□□□□□ -1.69
XRN1-201ENST00000264951 RNASE6Q93091 150 aaKnown RBP4.48□□□□□ -1.69
XRN1-201ENST00000264951 NHSQ6T4R5 1651 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 IGHV2-70DA0A0C4DH43 119 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 CRYBA4P53673 196 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
XRN1-201ENST00000264951 LAIR2Q6ISS4 152 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 C7orf69Q9H7B7 122 aa4.48□□□□□ -1.69
XRN1-201ENST00000264951 POLR3KQ9Y2Y1 108 aaPredicted RBP4.48□□□□□ -1.69
XRN1-201ENST00000264951 A0A0B4J2C4 111 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 PMS2P5A8MQ11 134 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CYTL1Q9NRR1 136 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 TRGV1A0A0A0MS02 117 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 ZFP36L1Q07352 338 aaKnown RBP4.47□□□□□ -1.69
XRN1-201ENST00000264951 ACACBO00763 2458 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 DLEC1Q9Y238 1755 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 LRP5O75197 1615 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 NDUFC1O43677 76 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 PSG7Q13046 419 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
XRN1-201ENST00000264951 CENPVL1A0A0U1RR11 272 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CXCL5P42830 114 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CSRP3P50461 194 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CHCHD2Q9Y6H1 151 aaPredicted RBP4.47□□□□□ -1.69
XRN1-201ENST00000264951 DDX60LQ5H9U9 1706 aaKnown RBP4.47□□□□□ -1.69
XRN1-201ENST00000264951 IGHV3OR16-13A0A075B7E8 117 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 IGHV3-74A0A0B4J1X5 117 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 IGKV3D-20A0A0C4DH25 116 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 TEX48A0A1B0GUV7 120 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 LCN12Q6JVE5 192 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 NHSL1Q5SYE7 1610 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 J3QQQ9 107 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 CFC1P0CG37 223 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 C5orf64Q2M2E5 130 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 YLPM1P49750 1951 aaKnown RBP4.47□□□□□ -1.69
XRN1-201ENST00000264951 CRYBA2P53672 197 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 TCF15Q12870 199 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 COLCA1Q6ZS62 124 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 DEFB125Q8N687 156 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 SPSB2Q99619 263 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
XRN1-201ENST00000264951 ECM29Q5VYK3 1845 aa4.46□□□□□ -1.69
XRN1-201ENST00000264951 ZFP2Q6ZN57 461 aa4.46□□□□□ -1.69
XRN1-201ENST00000264951 SRXN1Q9BYN0 137 aa4.46□□□□□ -1.69
XRN1-201ENST00000264951 PAPPAQ13219 1627 aa4.46□□□□□ -1.69
XRN1-201ENST00000264951 B5MCH6 92 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 C10orf91Q5T1B1 145 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 ZNF319Q9P2F9 582 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 TP53TG1Q9Y2A0 90 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 FAM216BQ8N7L0 139 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 BCORQ6W2J9 1755 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 TNRC6AQ8NDV7 1962 aaKnown RBP4.46□□□□□ -1.7
XRN1-201ENST00000264951 KIR2DL5BA0A0G2JN68 375 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 KIR2DL5BA0A0G2JPC4 375 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 C1QL2Q7Z5L3 287 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 KIR2DL5AQ8N109 375 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 SMRP1Q8NCR6 262 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 LEAP2Q969E1 77 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 SCN7AQ01118 1682 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 J3QRE1 110 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 EIF4EBP2Q13542 120 aaPredicted RBP4.46□□□□□ -1.7
XRN1-201ENST00000264951 ZCCHC24Q8N2G6 241 aaKnown RBP4.46□□□□□ -1.7
XRN1-201ENST00000264951 METRNQ9UJH8 293 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 HTN3P15516 51 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 C14orf178Q8N769 122 aaPredicted RBP4.46□□□□□ -1.7
XRN1-201ENST00000264951 ATAD5Q96QE3 1844 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 TRAV40A0A0B4J280 105 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-48P01763 117 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGHV2-5P01817 119 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 CDKN1AP38936 164 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 FDCSPQ8NFU4 85 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGLV3-12A0A075B6K2 115 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGKV1D-13A0A0B4J2D9 117 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-35A0A0C4DH35 117 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 IGKV1-13P0DP09 117 aa4.46□□□□□ -1.7
XRN1-201ENST00000264951 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 PSMB8P28062 276 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SCRT2Q9NQ03 307 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 BSPH1Q075Z2 132 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 ZNF329Q86UD4 541 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 ZNF625Q96I27 306 aaPredicted RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 COL11A1P12107 1806 aaPredicted RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 CELA2BP08218 269 aaPredicted RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 CRYGSP22914 178 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 GPHA2Q96T91 129 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SIGLEC9Q9Y336 463 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 LY75O60449 1722 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms