RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 RBPMS2Q6ZRY4 209 aaKnown RBP18.31■□□□□ 0.52
SCN1B-201ENST00000262631 MS4A6AQ9H2W1 248 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 OR51M1Q9H341 326 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 UQCC3Q6UW78 93 aa18.3■□□□□ 0.52
SCN1B-201ENST00000262631 STXBP6Q8NFX7 210 aa18.3■□□□□ 0.52
SCN1B-201ENST00000262631 RNF141Q8WVD5 230 aa18.3■□□□□ 0.52
SCN1B-201ENST00000262631 FXYD5Q96DB9 178 aa18.3■□□□□ 0.52
SCN1B-201ENST00000262631 PAXXQ9BUH6 204 aa18.3■□□□□ 0.52
SCN1B-201ENST00000262631 MAP1LC3B2A6NCE7 125 aa18.29■□□□□ 0.52
SCN1B-201ENST00000262631 ZNF705EA8MWA4 302 aaPredicted RBP18.29■□□□□ 0.52
SCN1B-201ENST00000262631 SFT2D1Q8WV19 159 aa18.29■□□□□ 0.52
SCN1B-201ENST00000262631 MAP1LC3BQ9GZQ8 125 aa18.29■□□□□ 0.52
SCN1B-201ENST00000262631 ZNF586Q9NXT0 402 aa18.29■□□□□ 0.52
SCN1B-201ENST00000262631 ZNF785A8K8V0 405 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 TEX46H3BTG2 121 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 CD5P06127 495 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 TFPI2P48307 235 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 PQLC2Q6ZP29 291 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 HRH4Q9H3N8 390 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 NRN1Q9NPD7 142 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 A0A1B0GV50 99 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 G3V4G9 280 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 H2AFB1P0C5Y9 115 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 WFDC3Q8IUB2 231 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 LINC00518Q8N0U6 118 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 OR2K2Q8NGT1 345 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 DCANP1Q8TF63 244 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 MBD3L1Q8WWY6 194 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 TMPRSS5Q9H3S3 457 aa18.28■□□□□ 0.52
SCN1B-201ENST00000262631 MGAM2Q2M2H8 2515 aa18.27■□□□□ 0.52
SCN1B-201ENST00000262631 TRAV25A0A0B4J276 109 aa18.27■□□□□ 0.52
SCN1B-201ENST00000262631 DNASE2O00115 360 aaPredicted RBP18.27■□□□□ 0.52
SCN1B-201ENST00000262631 UBE2L3P68036 154 aaKnown RBP18.27■□□□□ 0.52
SCN1B-201ENST00000262631 GUCA2BQ16661 112 aa18.27■□□□□ 0.52
SCN1B-201ENST00000262631 LCN12Q6JVE5 192 aa18.27■□□□□ 0.52
SCN1B-201ENST00000262631 A0A087X0K7 114 aa18.26■□□□□ 0.51
SCN1B-201ENST00000262631 SLC17A3O00476 420 aa18.26■□□□□ 0.51
SCN1B-201ENST00000262631 CXorf1O96002 111 aa18.26■□□□□ 0.51
SCN1B-201ENST00000262631 BLNKQ8WV28 456 aa18.26■□□□□ 0.51
SCN1B-201ENST00000262631 HIST1H1EP10412 219 aaKnown RBP18.25■□□□□ 0.51
SCN1B-201ENST00000262631 GCHFRP30047 84 aa18.25■□□□□ 0.51
SCN1B-201ENST00000262631 FAM24BQ8N5W8 94 aa18.25■□□□□ 0.51
SCN1B-201ENST00000262631 ZNF256Q9Y2P7 627 aaPredicted RBP18.25■□□□□ 0.51
SCN1B-201ENST00000262631 TRBV19A0A075B6N1 114 aa18.25■□□□□ 0.51
SCN1B-201ENST00000262631 SOCS3O14543 225 aa18.25■□□□□ 0.51
SCN1B-201ENST00000262631 NBEAP1P0C6P0 100 aa18.25■□□□□ 0.51
SCN1B-201ENST00000262631 SAT2Q96F10 170 aaPredicted RBP18.25■□□□□ 0.51
SCN1B-201ENST00000262631 SPAG8Q99932 426 aaPredicted RBP18.25■□□□□ 0.51
SCN1B-201ENST00000262631 RAB19A4D1S5 217 aa18.24■□□□□ 0.51
SCN1B-201ENST00000262631 APOC3P02656 99 aa18.24■□□□□ 0.51
SCN1B-201ENST00000262631 SAMD5Q5TGI4 173 aa18.24■□□□□ 0.51
SCN1B-201ENST00000262631 GPR61Q9BZJ8 451 aa18.24■□□□□ 0.51
SCN1B-201ENST00000262631 K7EQG2 157 aa18.23■□□□□ 0.51
SCN1B-201ENST00000262631 NDUFB4O95168 129 aa18.23■□□□□ 0.51
SCN1B-201ENST00000262631 PAFAH1B2P68402 229 aa18.23■□□□□ 0.51
SCN1B-201ENST00000262631 CCL20P78556 96 aa18.23■□□□□ 0.51
SCN1B-201ENST00000262631 IGFL4Q6B9Z1 124 aa18.23■□□□□ 0.51
SCN1B-201ENST00000262631 NKX6-2Q9C056 277 aaPredicted RBP18.23■□□□□ 0.51
SCN1B-201ENST00000262631 TRAV8-2A0A0B4J237 113 aa18.22■□□□□ 0.51
SCN1B-201ENST00000262631 KRTAP10-11P60412 298 aa18.22■□□□□ 0.51
SCN1B-201ENST00000262631 TRAV1-1A0A0B4J248 108 aa18.21■□□□□ 0.51
SCN1B-201ENST00000262631 S100A12P80511 92 aa18.21■□□□□ 0.51
SCN1B-201ENST00000262631 GUK1Q16774 197 aa18.21■□□□□ 0.51
SCN1B-201ENST00000262631 BEAN1Q3B7T3 259 aa18.21■□□□□ 0.51
SCN1B-201ENST00000262631 ZNF331Q9NQX6 463 aaPredicted RBP18.21■□□□□ 0.51
SCN1B-201ENST00000262631 HLA-DMBP28068 263 aa18.2■□□□□ 0.5
SCN1B-201ENST00000262631 MEOX2P50222 304 aa18.2■□□□□ 0.5
SCN1B-201ENST00000262631 EGFEM1PQ0D2K5 195 aa18.2■□□□□ 0.5
SCN1B-201ENST00000262631 C16orf92Q96LL3 132 aa18.2■□□□□ 0.5
SCN1B-201ENST00000262631 TRAV2A0A0B4J234 112 aa18.19■□□□□ 0.5
SCN1B-201ENST00000262631 OR4C46A6NHA9 309 aa18.19■□□□□ 0.5
SCN1B-201ENST00000262631 BLOC1S1P78537 153 aa18.19■□□□□ 0.5
SCN1B-201ENST00000262631 RNF182Q8N6D2 247 aa18.19■□□□□ 0.5
SCN1B-201ENST00000262631 TMEM167BQ9NRX6 74 aa18.19■□□□□ 0.5
SCN1B-201ENST00000262631 ZNF688P0C7X2 276 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 RANP62826 216 aaKnown RBP18.18■□□□□ 0.5
SCN1B-201ENST00000262631 PDE6HQ13956 83 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 C20orf173Q96LM9 149 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 NBEAL1Q6ZS30 2694 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 ISLRO14498 428 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 CD7P09564 240 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 PRB4P10163 310 aaPredicted RBP18.18■□□□□ 0.5
SCN1B-201ENST00000262631 EXOC3-AS1Q8N2X6 119 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 LYPD6BQ8NI32 183 aa18.18■□□□□ 0.5
SCN1B-201ENST00000262631 ZNF253O75346 499 aa18.17■□□□□ 0.5
SCN1B-201ENST00000262631 UBE2G2P60604 165 aa18.17■□□□□ 0.5
SCN1B-201ENST00000262631 SVBPQ8N300 66 aa18.17■□□□□ 0.5
SCN1B-201ENST00000262631 NOTCH1P46531 2555 aa18.17■□□□□ 0.5
SCN1B-201ENST00000262631 DNAH3Q8TD57 4116 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 SORL1Q92673 2214 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 HBE1P02100 147 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 ODF3L2Q3SX64 289 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 ATRAIDQ6UW56 229 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 SLC50A1Q9BRV3 221 aa18.16■□□□□ 0.5
SCN1B-201ENST00000262631 YTHDF2Q9Y5A9 579 aaKnown RBP18.16■□□□□ 0.5
SCN1B-201ENST00000262631 PSMB3P49720 205 aa18.15■□□□□ 0.5
SCN1B-201ENST00000262631 PRR25Q96S07 402 aa18.15■□□□□ 0.5
SCN1B-201ENST00000262631 Q9H3A6 140 aa18.15■□□□□ 0.5
SCN1B-201ENST00000262631 DEFB1P60022 68 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms