RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 RELNP78509 3460 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 IGHV3OR16-10A0A075B7F0 116 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 SRSF9Q13242 221 aaKnown RBP eCLIP11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 NDUFA3O95167 84 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 SPANXN1Q5VSR9 72 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
TUBGCP3-201ENST00000261965 TMPRSS3P57727 454 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 RUSC1-AS1Q66K80 236 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 LINC01560Q8TB33 94 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 CSMD1Q96PZ7 3565 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
TUBGCP3-201ENST00000261965 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 K7ERJ3 54 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 C1orf185Q5T7R7 199 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 SPTBN4Q9H254 2564 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 GAGE1Q13065 139 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 H0YJW9 148 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 C11orf52Q96A22 123 aa11.23□□□□□ -0.61
TUBGCP3-201ENST00000261965 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 OR1N2Q8NGR9 330 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 IGHV2-26A0A0B4J1V2 119 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 K7EP13 123 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 M0R381 172 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 LHBP01229 141 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 CGB3P0DN86 165 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 CGB7P0DN87 165 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 OR4A5Q8NH83 315 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 NGBQ9NPG2 151 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 Q1RN00 199 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
TUBGCP3-201ENST00000261965 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 LEPP41159 167 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 EMP1P54849 157 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 PPIAL4CA0A0B4J2A2 164 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 J3QR89 54 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 PPIAL4GP0DN37 164 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 Q71RC1 249 aaPredicted RBP11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 PPP1R27Q86WC6 154 aa11.21□□□□□ -0.61
TUBGCP3-201ENST00000261965 IGLC7A0M8Q6 106 aa11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 APOMO95445 188 aa11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM106CPP0CH98 169 aa11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 GLMPQ8WWB7 406 aa11.21□□□□□ -0.62
TUBGCP3-201ENST00000261965 LRBAP50851 2863 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 SLC25A39Q9BZJ4 359 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 IGKV3-20P01619 116 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 KLRD1Q13241 179 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 TMEM249Q2WGJ8 235 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 JKAMPQ9P055 326 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 LINC00312Q9Y6C7 94 aa11.2□□□□□ -0.62
TUBGCP3-201ENST00000261965 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 MC5RP33032 325 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 PAX1P15863 534 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms