RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 SP9P0CG40 484 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 SCGB1C2P0DMR2 95 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 FAM231DQ6ZW35 169 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 APOMO95445 188 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 IL4P05112 153 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 NCOR1P1Q9H4R4 102 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 DMXL2Q8TDJ6 3036 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 ZFHX4Q86UP3 3567 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 BMI1P35226 326 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 CACNG8Q8WXS5 425 aa12.78□□□□□ -0.36
PRPF40B-201ENST00000261897 F2RL2O00254 374 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 LINC01545Q5VT33 79 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 KIR2DL2P43627 348 aaPredicted RBP12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 C17orf58Q2M2W7 97 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 OR4C13Q8NGP0 309 aa12.77□□□□□ -0.36
PRPF40B-201ENST00000261897 FTH1P19P0C7X4 201 aa12.77□□□□□ -0.37
PRPF40B-201ENST00000261897 CD40P25942 277 aa12.77□□□□□ -0.37
PRPF40B-201ENST00000261897 Q6ZT83 130 aa12.77□□□□□ -0.37
PRPF40B-201ENST00000261897 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
PRPF40B-201ENST00000261897 PSG8Q9UQ74 426 aa12.77□□□□□ -0.37
PRPF40B-201ENST00000261897 KALRNO60229 2985 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 C16orf54Q6UWD8 224 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 Q86TA4 180 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 C9orf106Q8NAJ2 232 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 ZNF502Q8TBZ5 544 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 SS18L1O75177 396 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 CNTFRP26992 372 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 TACC2O95359 2948 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 IGHV3-66A0A0C4DH42 116 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 FER1L6-AS2Q96M78 137 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 ATP6V0BQ99437 205 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 CYSLTR1Q9Y271 337 aa12.76□□□□□ -0.37
PRPF40B-201ENST00000261897 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 LGALS7P47929 136 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 IGHV1-18A0A0C4DH31 117 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 A0A1B0GXF2 115 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 PSMB2P49721 201 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 TMEM133Q9H2Q1 129 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 DSCAMO60469 2012 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 RUSC1-AS1Q66K80 236 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 NDFIP1Q9BT67 221 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 DYNLRB1Q9NP97 96 aa12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-201ENST00000261897 NPYP01303 97 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 INSL3P51460 131 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 TRAV40A0A0B4J280 105 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 SORL1Q92673 2214 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 VGLL1Q99990 258 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 SOX21Q9Y651 276 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-201ENST00000261897 C22orf46C9J442 243 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 MAP1LC3AQ9H492 121 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 SLC25A48Q6ZT89 311 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 RITA1Q96K30 269 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 INSIG2Q9Y5U4 225 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 DDB2Q92466 427 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 ARHGAP32A7KAX9 2087 aa12.73□□□□□ -0.37
PRPF40B-201ENST00000261897 ATMQ13315 3056 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 TTC9CQ8N5M4 171 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 IGKV2D-26A0A0A0MRZ7 120 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 C9orf172C9J069 976 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 NDUFB3O43676 98 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 MSMPQ1L6U9 139 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 RPEQ96AT9 228 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 MGAQ8IWI9 3026 aa12.72□□□□□ -0.37
PRPF40B-201ENST00000261897 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 SPRY2O43597 315 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 SPINK8P0C7L1 97 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 SLC25A39Q9BZJ4 359 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 EMP1P54849 157 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms