RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 AKAP6Q13023 2319 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
CTSD-201ENST00000236671 TRBV6-1A0A0K0K1D8 114 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 SYS1-DBNDD2H3BUS1 97 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 HAX1O00165 279 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 TOX4O94842 621 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 COX7A1P24310 79 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 NGBQ9NPG2 151 aa12.29□□□□□ -0.44
CTSD-201ENST00000236671 ABCA12Q86UK0 2595 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 SETXQ7Z333 2677 aaKnown RBP12.28□□□□□ -0.44
CTSD-201ENST00000236671 OR4C46A6NHA9 309 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 CHEK1O14757 476 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 PPP1R14DQ9NXH3 145 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 A1L4Q6 167 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 LYNX1G3V0Z9 82 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 RBP4P02753 201 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 LYNX1P0DP58 116 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 APOBEC3AP31941 199 aaPredicted RBP12.28□□□□□ -0.44
CTSD-201ENST00000236671 MUC15Q8N387 334 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 ITLN2Q8WWU7 325 aaPredicted RBP12.28□□□□□ -0.44
CTSD-201ENST00000236671 RPEQ96AT9 228 aa12.28□□□□□ -0.44
CTSD-201ENST00000236671 LEPROTL1O95214 131 aa12.27□□□□□ -0.45
CTSD-201ENST00000236671 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.45
CTSD-201ENST00000236671 ITPR2Q14571 2701 aa12.27□□□□□ -0.45
CTSD-201ENST00000236671 TRBV19A0A075B6N1 114 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 B9A039 149 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 K7EIM0 57 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 UNQ5815/PRO19632Q6UWF5 114 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 C17orf77Q96MU5 243 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.26□□□□□ -0.45
CTSD-201ENST00000236671 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 H3BRN7 92 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 TCF21O43680 179 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 Q6ZVH6 145 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 SRSF8Q9BRL6 282 aaKnown RBP12.26□□□□□ -0.45
CTSD-201ENST00000236671 ABCA1O95477 2261 aa12.26□□□□□ -0.45
CTSD-201ENST00000236671 POLQO75417 2590 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 C19orf84I3L1E1 186 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 ZNF138P52744 262 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 PLGLAQ15195 96 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 RNF5Q99942 180 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 LIPFP07098 398 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 BPIFA4PQ86YQ2 179 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 GATD1Q8NB37 220 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
CTSD-201ENST00000236671 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
CTSD-201ENST00000236671 hDV102S1A0JD36 115 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 ARMS2P0C7Q2 107 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 HIST2H2BCQ6DN03 193 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 ASCL2Q99929 193 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 APCP25054 2843 aa12.24□□□□□ -0.45
CTSD-201ENST00000236671 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
CTSD-201ENST00000236671 CD3EP07766 207 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 ZNF491Q8N8L2 437 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 TIMM23O14925 209 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 CCL25O15444 150 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 CNIH1O95406 144 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 HTR1DP28221 377 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 RNF24Q9Y225 148 aa12.23□□□□□ -0.45
CTSD-201ENST00000236671 PRB4P10163 310 aaPredicted RBP12.22□□□□□ -0.45
CTSD-201ENST00000236671 CRIP1P50238 77 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 PSG3Q16557 428 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 PET117Q6UWS5 81 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 LYPD1Q8N2G4 141 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 RNF125Q96EQ8 232 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 MAP1LC3CQ9BXW4 147 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 TMEM191AQ9H0A3 160 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 RIGQ13278 110 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
CTSD-201ENST00000236671 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
CTSD-201ENST00000236671 IL4P05112 153 aa12.21□□□□□ -0.45
CTSD-201ENST00000236671 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.45
CTSD-201ENST00000236671 ZNF414Q96IQ9 312 aa12.21□□□□□ -0.45
CTSD-201ENST00000236671 ONECUT1Q9UBC0 465 aa12.21□□□□□ -0.45
CTSD-201ENST00000236671 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 K7EQM0 130 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 NBR2O15453 112 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 CSN3P07498 182 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 UNC79Q9P2D8 2635 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 M0R3E3 92 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
CTSD-201ENST00000236671 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms