RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZFP36P26651 326 aaKnown RBP17.23■□□□□ 0.35
SMARCD2-201ENST00000225742 SH2D7A6NKC9 451 aaPredicted RBP17.22■□□□□ 0.35
SMARCD2-201ENST00000225742 TOX4O94842 621 aa17.22■□□□□ 0.35
SMARCD2-201ENST00000225742 NDUFB8O95169 186 aa17.22■□□□□ 0.35
SMARCD2-201ENST00000225742 SFTPCP11686 197 aa17.22■□□□□ 0.35
SMARCD2-201ENST00000225742 SPTBN2O15020 2390 aa17.22■□□□□ 0.35
SMARCD2-201ENST00000225742 IGHV2-70DA0A0C4DH43 119 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 TCAPO15273 167 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 URB1-AS1Q96HZ7 61 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 OVOL3O00110 214 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 CT45A10P0DMU9 189 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 UBE2E1P51965 193 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 EFNA4P52798 201 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 COX8CQ7Z4L0 72 aa17.21■□□□□ 0.35
SMARCD2-201ENST00000225742 ATMQ13315 3056 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 IGHV7-81A0A0B4J1V7 117 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 C2orf70A6NJV1 201 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 OR5AL1P0C617 328 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 EGR2P11161 476 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 NHLH1Q02575 133 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 EBLN2Q6P2I7 272 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 S4R3C0 116 aa17.2■□□□□ 0.34
SMARCD2-201ENST00000225742 IGLC3P0DOY3 106 aa17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 Q8N9W7 124 aa17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 FAM110DQ8TAY7 271 aaPredicted RBP17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 RABAC1Q9UI14 185 aa17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 ARHGAP32A7KAX9 2087 aa17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 RPLP1P05386 114 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 SAPCD1Q5SSQ6 148 aa17.19■□□□□ 0.34
SMARCD2-201ENST00000225742 LAMA5O15230 3695 aa17.18■□□□□ 0.34
SMARCD2-201ENST00000225742 TRAV9-2A0A087WT02 112 aa17.18■□□□□ 0.34
SMARCD2-201ENST00000225742 CTSGP08311 255 aa17.18■□□□□ 0.34
SMARCD2-201ENST00000225742 LINC00614P0C842 121 aa17.18■□□□□ 0.34
SMARCD2-201ENST00000225742 TMEM70Q9BUB7 260 aa17.18■□□□□ 0.34
SMARCD2-201ENST00000225742 CRIP1P50238 77 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 LPAR2Q9HBW0 351 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 ABCA4P78363 2273 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 M0R3E3 92 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 CRXO43186 299 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 RAB9AP51151 201 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 FAM120AOSQ5T036 256 aa17.17■□□□□ 0.34
SMARCD2-201ENST00000225742 A0A1W2PPR1 153 aa17.16■□□□□ 0.34
SMARCD2-201ENST00000225742 BCL6BQ8N143 479 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-201ENST00000225742 ABCA1O95477 2261 aa17.15■□□□□ 0.34
SMARCD2-201ENST00000225742 OR2T8A6NH00 312 aa17.15■□□□□ 0.34
SMARCD2-201ENST00000225742 UBTD1Q9HAC8 227 aa17.15■□□□□ 0.34
SMARCD2-201ENST00000225742 CEP295Q9C0D2 2601 aa17.15■□□□□ 0.34
SMARCD2-201ENST00000225742 IGHV1-24A0A0C4DH33 117 aa17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 ARMS2P0C7Q2 107 aa17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 RPS20P60866 119 aaKnown RBP17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 LCN12Q6JVE5 192 aa17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 ZNF493Q6ZR52 646 aa17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 Q71RC1 249 aaPredicted RBP17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 AJUBAQ96IF1 538 aa17.14■□□□□ 0.34
SMARCD2-201ENST00000225742 TMEM189A5PLL7 270 aa17.14■□□□□ 0.33
SMARCD2-201ENST00000225742 ZNF502Q8TBZ5 544 aa17.14■□□□□ 0.33
SMARCD2-201ENST00000225742 TPRP12270 2363 aaKnown RBP17.13■□□□□ 0.33
SMARCD2-201ENST00000225742 DMXL2Q8TDJ6 3036 aa17.13■□□□□ 0.33
SMARCD2-201ENST00000225742 LEPROTL1O95214 131 aa17.13■□□□□ 0.33
SMARCD2-201ENST00000225742 C8orf49Q96NF6 230 aa17.13■□□□□ 0.33
SMARCD2-201ENST00000225742 HNRNPA3P51991 378 aaKnown RBP17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 LMO4P61968 165 aa17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 NDUFS7O75251 213 aa17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 IGHV3-23P01764 117 aa17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 SRSF2Q01130 221 aaKnown RBP17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 UNQ5815/PRO19632Q6UWF5 114 aa17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 Q6ZN92 141 aa17.12■□□□□ 0.33
SMARCD2-201ENST00000225742 A0A087X0K7 114 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 SYS1-DBNDD2H3BUS1 97 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 SH2D1AO60880 128 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 COL5A1-AS1Q5SY13 56 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 PRR25Q96S07 402 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 CLEC5AQ9NY25 188 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 HSPB8Q9UJY1 196 aa17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 MRPS16Q9Y3D3 137 aaKnown RBP17.11■□□□□ 0.33
SMARCD2-201ENST00000225742 BMI1P35226 326 aa17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 RELQ04864 619 aaPredicted RBP17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 ADGRG4Q8IZF6 3080 aa17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 TMUB1Q9BVT8 246 aa17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 SMAD5-AS1Q9Y6J3 95 aa17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 SMG1Q96Q15 3661 aaKnown RBP17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 PET117Q6UWS5 81 aa17.1■□□□□ 0.33
SMARCD2-201ENST00000225742 M0QZ24 198 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 GOSR1O95249 250 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 SAA4P35542 130 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 C15orf32Q32M92 178 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 ATOH7Q8N100 152 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 ITLN2Q8WWU7 325 aaPredicted RBP17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 PRORYQ9H606 182 aa17.09■□□□□ 0.33
SMARCD2-201ENST00000225742 NPFFO15130 113 aa17.08■□□□□ 0.33
SMARCD2-201ENST00000225742 PRR31Q5SQ13 230 aa17.08■□□□□ 0.33
SMARCD2-201ENST00000225742 MAP1LC3CQ9BXW4 147 aa17.08■□□□□ 0.33
SMARCD2-201ENST00000225742 U3KQK5 164 aa17.08■□□□□ 0.33
SMARCD2-201ENST00000225742 SPTA1P02549 2419 aa17.08■□□□□ 0.32
SMARCD2-201ENST00000225742 IGKV2-40A0A087WW87 121 aaPredicted RBP17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 IGKV2D-40P01614 121 aaPredicted RBP17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 RHOGP84095 191 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 ASCL2Q99929 193 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 TMEM191AQ9H0A3 160 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 ZFAND3Q9H8U3 227 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms