RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RBMY1DP0C7P1 496 aaKnown RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 LINC00614P0C842 121 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 RBMY1A1P0DJD3 496 aaKnown RBP14.87□□□□□ -0.03
CLIP2-201ENST00000223398 RBMY1CP0DJD4 496 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 DDTP30046 118 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 FOXL1Q12952 345 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 DIAPH2-AS1Q14236 149 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 SFTA2Q6UW10 78 aa14.87□□□□□ -0.03
CLIP2-201ENST00000223398 MMP23AO75900 390 aa14.86□□□□□ -0.03
CLIP2-201ENST00000223398 KNCNA6PVL3 124 aa14.86□□□□□ -0.03
CLIP2-201ENST00000223398 PPBPP02775 128 aa14.86□□□□□ -0.03
CLIP2-201ENST00000223398 PSG3Q16557 428 aa14.86□□□□□ -0.03
CLIP2-201ENST00000223398 NRN1Q9NPD7 142 aa14.86□□□□□ -0.03
CLIP2-201ENST00000223398 CHTOPQ9Y3Y2 248 aaKnown RBP14.85□□□□□ -0.03
CLIP2-201ENST00000223398 J3QLI3 93 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 SHISA9B4DS77 424 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 DKK1O94907 266 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 CD300EQ496F6 205 aaPredicted RBP14.85□□□□□ -0.03
CLIP2-201ENST00000223398 LMO1P25800 156 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 DMRTA1Q5VZB9 504 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 Q6ZS49 121 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 IGFBPL1Q8WX77 278 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 PRDM13Q9H4Q3 707 aa14.85□□□□□ -0.03
CLIP2-201ENST00000223398 D6R8Y8 96 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 SPINK13Q1W4C9 94 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 TPSG1Q9NRR2 321 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 LINC00158P58513 81 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 PGPEP1Q9NXJ5 209 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 CKS1BP61024 79 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 CYTL1Q9NRR1 136 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 TRAV2A0A0B4J234 112 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 C1orf159Q96HA4 380 aa14.84□□□□□ -0.03
CLIP2-201ENST00000223398 F5H768 121 aa14.83□□□□□ -0.04
CLIP2-201ENST00000223398 LSM4Q9Y4Z0 139 aaKnown RBP14.83□□□□□ -0.04
CLIP2-201ENST00000223398 ANAPC1Q9H1A4 1944 aa14.83□□□□□ -0.04
CLIP2-201ENST00000223398 TEX36Q5VZQ5 186 aa14.83□□□□□ -0.04
CLIP2-201ENST00000223398 NIT1Q86X76 327 aa14.83□□□□□ -0.04
CLIP2-201ENST00000223398 RSPO3Q9BXY4 272 aaPredicted RBP14.83□□□□□ -0.04
CLIP2-201ENST00000223398 TCTEX1D4Q5JR98 221 aa14.83□□□□□ -0.04
CLIP2-201ENST00000223398 ZNF833PQ6ZTB9 187 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 SHANK2-AS3Q9BTD1 123 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 KLK9Q9UKQ9 250 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 NPC2P61916 151 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 DEFB112Q30KQ8 113 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 DMRTC2Q8IXT2 367 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-201ENST00000223398 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 DEFB113Q30KQ7 82 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 CREBBPQ92793 2442 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 FGF16O43320 207 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 OR5A1Q8NGJ0 315 aa14.82□□□□□ -0.04
CLIP2-201ENST00000223398 DPM2O94777 84 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 LINC00479Q96M42 142 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 IGHV4-59P01825 116 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 GTF3C1Q12789 2109 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 C22orf46C9J442 243 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 RSPO1Q2MKA7 263 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-201ENST00000223398 SRSF8Q9BRL6 282 aaKnown RBP14.81□□□□□ -0.04
CLIP2-201ENST00000223398 LAGE3Q14657 143 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 TMEM170AQ8WVE7 144 aa14.81□□□□□ -0.04
CLIP2-201ENST00000223398 ITGB1BP1O14713 200 aa14.8□□□□□ -0.04
CLIP2-201ENST00000223398 TYMSP04818 313 aa14.8□□□□□ -0.04
CLIP2-201ENST00000223398 IGHV3-16A0A0C4DH30 117 aa14.8□□□□□ -0.04
CLIP2-201ENST00000223398 SLC25A20O43772 301 aa14.8□□□□□ -0.04
CLIP2-201ENST00000223398 MST1LQ2TV78 715 aa14.8□□□□□ -0.04
CLIP2-201ENST00000223398 K7ERU9 68 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 DAD1P61803 113 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 NOTCH2Q04721 2471 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 NDUFA4L2Q9NRX3 87 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 ZNF134P52741 427 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 GNB1LQ9BYB4 327 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 HEATR5AQ86XA9 2040 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 IGHV4-30-2A0A087WSY4 118 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 IGHV2-5P01817 119 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 IGHV4-61A0A0C4DH41 118 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 SMKR1H3BMG3 65 aa14.79□□□□□ -0.04
CLIP2-201ENST00000223398 TRAV13-1A0A0B4J241 112 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 CSTL1Q9H114 145 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 PLXND1Q9Y4D7 1925 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 IFI27L1Q96BM0 104 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 ZNF815PA8K554 130 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 TMEM14BQ9NUH8 114 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 MYLKQ15746 1914 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 TDGF1P3P51864 188 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 LINC01551Q86U37 167 aa14.78□□□□□ -0.04
CLIP2-201ENST00000223398 TRAV12-2A0A075B6T6 113 aa14.77□□□□□ -0.04
CLIP2-201ENST00000223398 S100A7L2Q5SY68 101 aa14.77□□□□□ -0.04
CLIP2-201ENST00000223398 A0A1W2PNU3 283 aaPredicted RBP14.77□□□□□ -0.04
CLIP2-201ENST00000223398 SPRNQ5BIV9 151 aa14.77□□□□□ -0.04
CLIP2-201ENST00000223398 IGKCP01834 107 aa14.77□□□□□ -0.05
CLIP2-201ENST00000223398 ATP5L2Q7Z4Y8 100 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 LYPD1Q8N2G4 141 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 PARD6GQ9BYG4 376 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-201ENST00000223398 ARMS2P0C7Q2 107 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 SSBP2P81877 361 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-201ENST00000223398 VOPP1Q96AW1 172 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 CTSZQ9UBR2 303 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 IGHV4-39P01824 125 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 IGFL2Q6UWQ7 119 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 TMEM86BQ8N661 226 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE12JA6NER3 117 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms