RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SIGLEC12Q96PQ1 595 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 IGHG2P01859 326 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 IGHV1-2P23083 117 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 KLRD1Q13241 179 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 A0A1W2PR77 199 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 IL18BPO95998 194 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 SEC61GP60059 68 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 SLC25A45Q8N413 288 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 TRBV25-1A0A075B6N4 114 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 UTF1Q5T230 341 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-201ENST00000216484 TFF1P04155 84 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 VMO1Q7Z5L0 202 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 MSRB2Q9Y3D2 182 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 GREM1O60565 184 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 CRYBA4P53673 196 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 TMEM256Q8N2U0 113 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 ATG2AQ2TAZ0 1938 aa12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.03□□□□□ -0.48
SPTLC2-201ENST00000216484 PPDPFLQ8WWR9 84 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 TRPM3Q9HCF6 1732 aaPredicted RBP12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 PRSS57Q6UWY2 283 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 PLAC1Q9HBJ0 212 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 FAM231BA6NCW3 169 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 J3QW42 95 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 CELA3AP09093 270 aa12.02□□□□□ -0.48
SPTLC2-201ENST00000216484 F8W1H4 67 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 CTSBP07858 339 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 SP9P0CG40 484 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 ADAMTS9Q9P2N4 1935 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 SPANXDQ9BXN6 97 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 NXPH4O95158 308 aa12.02□□□□□ -0.49
SPTLC2-201ENST00000216484 RNF222A6NCQ9 220 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 GAGE7O76087 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 CD160O95971 181 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 DSCAMO60469 2012 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 UBE2BP63146 152 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 ZNF362Q5T0B9 420 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 C3orf56Q8N813 242 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 IGKV1D-13A0A0B4J2D9 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 IGKV1-13P0DP09 117 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 THBDP07204 575 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 DAD1P61803 113 aa12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 TRPT1Q86TN4 253 aaKnown RBP12.01□□□□□ -0.49
SPTLC2-201ENST00000216484 TECTAO75443 2155 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 POU2AF1Q16633 256 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 RNASE6Q93091 150 aaKnown RBP12□□□□□ -0.49
SPTLC2-201ENST00000216484 VSIRQ9H7M9 311 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 IGHV4-28A0A0C4DH34 117 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 DKK1O94907 266 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 DKK4Q9UBT3 224 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 TP53TG1Q9Y2A0 90 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 C3orf79P0CE67 100 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
SPTLC2-201ENST00000216484 SRSF8Q9BRL6 282 aaKnown RBP12□□□□□ -0.49
SPTLC2-201ENST00000216484 FBLIM1Q8WUP2 373 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 LRP5O75197 1615 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 TRBV6-7A0A0A0MS04 114 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 TRAV13-2A0A0B4J235 113 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 SUPT4H1P63272 117 aaKnown RBP11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 AGMATQ9BSE5 352 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 A8MWP6 167 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 TIAF1O95411 115 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 AZU1P20160 251 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 SLAQ13239 276 aa11.99□□□□□ -0.49
SPTLC2-201ENST00000216484 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 RNASE2P10153 161 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 EXPH5Q8NEV8 1989 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 IGHV2-26A0A0B4J1V2 119 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 C9orf118A6NHY6 69 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 FAM104BQ5XKR9 115 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 IGFL4Q6B9Z1 124 aa11.98□□□□□ -0.49
SPTLC2-201ENST00000216484 IGHV4-4A0A075B6R2 117 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 I3L3M4 83 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 IGFBP3P17936 291 aaPredicted RBP11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 SPATA31B1PQ5VZV4 182 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 RIF1Q5UIP0 2472 aaKnown RBP11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 PRSS29PA6NIE9 313 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms