RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SNCAP37840 140 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 DYNLT3P51808 116 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 ARPP19P56211 112 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 YPEL3P61236 119 aaPredicted RBP2.09□□□□□ -2.07
PSPC1-208ENST00000635562 UBE2BP63146 152 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 HBBP68871 147 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SPRNQ5BIV9 151 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 LINC01545Q5VT33 79 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 TMEM91Q6ZNR0 172 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SCXQ7RTU7 201 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 ARPINQ7Z6K5 226 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF645Q8N7E2 425 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 LINC00301Q8NCQ3 95 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 MORN4Q8NDC4 146 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 COPS9Q8WXC6 57 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 RNASE6Q93091 150 aaKnown RBP2.09□□□□□ -2.07
PSPC1-208ENST00000635562 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 VGLL1Q99990 258 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SND1-IT1Q9HBX3 110 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 UQCR10Q9UDW1 63 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 TAC3Q9UHF0 121 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 KLK5Q9Y337 293 aaPredicted RBP2.09□□□□□ -2.07
PSPC1-208ENST00000635562 LINC00588Q9Y4M8 146 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SMAD5-AS1Q9Y6J3 95 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 SERP1Q9Y6X1 66 aa2.09□□□□□ -2.07
PSPC1-208ENST00000635562 RAPGEF6Q8TEU7 1601 aa2.09□□□□□ -2.08
PSPC1-208ENST00000635562 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 TET2Q6N021 2002 aaPredicted RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 NCOA2Q15596 1464 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 SETBP1Q9Y6X0 1596 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 TRBV20-1A0A075B6N2 111 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 TRGV5A0A0B4J1U4 118 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1-12A0A0C4DH73 117 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 A0A0D9SG52 128 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 OOSP1A8MZH6 123 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 C19orf84I3L1E1 186 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 APOC4-APOC2K7ER74 178 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 SYNGR2O43760 224 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 PITX3O75364 302 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 NDUFB6O95139 128 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1D-12P01611 117 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 APOC2P02655 101 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 PRM2P04554 102 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 RNASE4P34096 147 aaKnown RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 CRISP3P54108 245 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 CXCL6P80162 114 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 FOXF1Q12946 379 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 LGALS9CQ6DKI2 356 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 LAIR2Q6ISS4 152 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 CEMP1Q6PRD7 247 aaPredicted RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 Q6ZS92 163 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 BPIFA4PQ86YQ2 179 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 SLC25A29Q8N8R3 303 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 OR8A1Q8NGG7 326 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF431Q8TF32 576 aaPredicted RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 LSM10Q969L4 123 aaKnown RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 VSIG2Q96IQ7 327 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 Q9H3A6 140 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 ASF1BQ9NVP2 202 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 DNAJC15Q9Y5T4 150 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 ABCA6Q8N139 1617 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 DSCAMO60469 2012 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 TRPM3Q9HCF6 1732 aaPredicted RBP2.08□□□□□ -2.08
PSPC1-208ENST00000635562 NWD2Q9ULI1 1742 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 KDM3BQ7LBC6 1761 aa2.08□□□□□ -2.08
PSPC1-208ENST00000635562 BTAF1O14981 1849 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 CUX1P39880 1505 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 DLC1Q96QB1 1528 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 MED1Q15648 1581 aaPredicted RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 CFAP74Q9C0B2 1584 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 LAMC3Q9Y6N6 1575 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 ZFC3H1O60293 1989 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TANC2Q9HCD6 1990 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TRPM6Q9BX84 2022 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 KIF14Q15058 1648 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 MADDQ8WXG6 1647 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 MAP3K4Q9Y6R4 1608 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 CFAP43Q8NDM7 1665 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3OR15-7A0A075B7D8 119 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1-6A0A0C4DH72 117 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 MCRIP1C9JLW8 97 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 H3BT86 120 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 HIST1H2BKO60814 126 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF324O75467 553 aaPredicted RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 SFT2D2O95562 160 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1-39P01597 117 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 RBP4P02753 201 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 IGKV1D-39P04432 117 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 HIST1H2BJP06899 126 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TRGC1P0CF51 173 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 FABP4P15090 132 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 S100A4P26447 101 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TAS2R45P59539 299 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms