RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
SNORD3D-201ENST00000619178 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
SNORD3D-201ENST00000619178 TMEM14CQ9P0S9 112 aa8.42□□□□□ -1.06
SNORD3D-201ENST00000619178 U3KQE9 123 aa8.42□□□□□ -1.06
SNORD3D-201ENST00000619178 IGHV3OR16-8A0A075B7F1 116 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 CHEK1O14757 476 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 ZNF207O43670 478 aaKnown RBP8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 IFNA1P01562 189 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 STAG3L2P0CL84 134 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 TAGLN2P37802 199 aaKnown RBP8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 PSMB3P49720 205 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 RPL11P62913 178 aaKnown RBP8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 PATE2Q6UY27 113 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 RBPMS2Q6ZRY4 209 aaKnown RBP8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 SPATA3Q8NHX4 192 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 SFT2D1Q8WV19 159 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 PAXXQ9BUH6 204 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 MAP1LC3BQ9GZQ8 125 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 OR51M1Q9H341 326 aa8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
SNORD3D-201ENST00000619178 ZNF785A8K8V0 405 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 SAP30O75446 220 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 GCSAMLQ5JQS6 135 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 FAM74A1Q5RGS3 127 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 LCN15Q6UWW0 184 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 IQCF2Q8IXL9 164 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 SCRT1Q9BWW7 348 aa8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
SNORD3D-201ENST00000619178 TRAV1-1A0A0B4J248 108 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 CSN3P07498 182 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 ID1P41134 155 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 CMC4P56277 68 aaPredicted RBP8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 PSG9Q00887 426 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 PDE6HQ13956 83 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 PRR31Q5SQ13 230 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 TCF24Q7RTU0 167 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 RFNGQ9Y644 331 aa8.39□□□□□ -1.07
SNORD3D-201ENST00000619178 A0A087X0K7 114 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 ZNF253O75346 499 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 WFDC9Q8NEX5 89 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 GLMPQ8WWB7 406 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 TXNDC17Q9BRA2 123 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 SLC25A2Q9BXI2 301 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 NRN1Q9NPD7 142 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 ARL2-SNX15V9GYD0 113 aa8.38□□□□□ -1.07
SNORD3D-201ENST00000619178 COL6A5A8TX70 2615 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 IGHV3-49A0A0A0MS15 119 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 OR4C46A6NHA9 309 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 RGS13O14921 159 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 NBEAP1P0C6P0 100 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 GCHFRP30047 84 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 SNRPD3P62318 126 aaKnown RBP8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 LEMD1Q68G75 181 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 HIST2H2BDQ6DRA6 164 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 ZNF414Q96IQ9 312 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 MDFIQ99750 246 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 SPAG8Q99932 426 aaPredicted RBP8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 SORL1Q92673 2214 aa8.37□□□□□ -1.07
SNORD3D-201ENST00000619178 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 TSPAN4O14817 238 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 GP9P14770 177 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 FHITP49789 147 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 PMS2P11Q13670 270 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 CLLU1Q5K131 121 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 SPATA31B1PQ5VZV4 182 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 SUN5Q8TC36 379 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 FAM167A-AS1Q96KT0 104 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 MLXQ9UH92 298 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 PRELID1Q9Y255 219 aa8.36□□□□□ -1.07
SNORD3D-201ENST00000619178 STAB1Q9NY15 2570 aa8.35□□□□□ -1.07
SNORD3D-201ENST00000619178 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
SNORD3D-201ENST00000619178 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
SNORD3D-201ENST00000619178 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms