RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
PTPN9-206ENST00000618819 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 NTF4P34130 210 aa11.86□□□□□ -0.51
PTPN9-206ENST00000618819 TRAV26-2A0A0B4J265 109 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
PTPN9-206ENST00000618819 DTX1Q86Y01 620 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 C8orf49Q96NF6 230 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 SHISA9B4DS77 424 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 KLRD1Q13241 179 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 F5P12259 2224 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 LY75O60449 1722 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 IL18BPO95998 194 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 PPP1R32Q7Z5V6 425 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 NTN5Q8WTR8 489 aaPredicted RBP11.85□□□□□ -0.51
PTPN9-206ENST00000618819 DKK1O94907 266 aa11.85□□□□□ -0.51
PTPN9-206ENST00000618819 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 CHKB-CPT1BH3BT56 60 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 Q6ZVH6 145 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 MSRB2Q9Y3D2 182 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 UNC13CQ8NB66 2214 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 Q6ZWC4 215 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 IGHV2-70P01814 119 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 NRXN3Q9Y4C0 1643 aa11.84□□□□□ -0.51
PTPN9-206ENST00000618819 WIPF3A6NGB9 483 aa11.83□□□□□ -0.51
PTPN9-206ENST00000618819 THAP8Q8NA92 274 aa11.83□□□□□ -0.51
PTPN9-206ENST00000618819 HEATR1Q9H583 2144 aaKnown RBP11.83□□□□□ -0.52
PTPN9-206ENST00000618819 Q86TA4 180 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 PAPPAQ13219 1627 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 A0A1B0GWJ7 208 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 IGLL1P15814 213 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 DAD1P61803 113 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 HLA-DRB4P13762 266 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 HLA-DRB4X5D2U9 266 aa11.83□□□□□ -0.52
PTPN9-206ENST00000618819 LINC00205P59089 165 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 TRGV9Q99603 122 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 CCL25O15444 150 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 MST1P26927 711 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 Q0VG73 95 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 SVILO95425 2214 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV1-24A0A0C4DH33 117 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 TAL2Q16559 108 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 MPDZO75970 2070 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IGKV1-5P01602 117 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IGHG2P01859 326 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
PTPN9-206ENST00000618819 C9orf106Q8NAJ2 232 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 CRYGCP07315 174 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
PTPN9-206ENST00000618819 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 BRK1Q8WUW1 75 aa11.82□□□□□ -0.52
PTPN9-206ENST00000618819 MLANAQ16655 118 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 SMRP1Q8NCR6 262 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 COX8AP10176 69 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
PTPN9-206ENST00000618819 ASPHD1Q5U4P2 390 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV2-26A0A0B4J1V2 119 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 VMO1Q7Z5L0 202 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 IGKV1-12A0A0C4DH73 117 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 IGKV1D-12P01611 117 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 IFI6P09912 130 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 KLF5Q13887 457 aaPredicted RBP11.81□□□□□ -0.52
PTPN9-206ENST00000618819 NRN1LQ496H8 165 aa11.81□□□□□ -0.52
PTPN9-206ENST00000618819 SPANXDQ9BXN6 97 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 GAS1P54826 345 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 FOXF2Q12947 444 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 SPSB3Q6PJ21 355 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV4-28A0A0C4DH34 117 aa11.8□□□□□ -0.52
PTPN9-206ENST00000618819 C9JQL5 133 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 LINC00114Q6XXX2 140 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 KLK9Q9UKQ9 250 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 COL22A1Q8NFW1 1626 aaPredicted RBP11.79□□□□□ -0.52
PTPN9-206ENST00000618819 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 TMEM141Q96I45 108 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 IGHV1-3A0A0C4DH29 117 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 NMSQ5H8A3 153 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 MDS2Q8NDY4 140 aa11.79□□□□□ -0.52
PTPN9-206ENST00000618819 LRP5O75197 1615 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
PTPN9-206ENST00000618819 CYYR1Q96J86 154 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms