RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 OR11H7Q8NGC8 314 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 RAB2BQ8WUD1 216 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
LINC01842-201ENST00000588275 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
LINC01842-201ENST00000588275 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 SYNGR2O43760 224 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 DUSP14O95147 198 aaKnown RBP11.86□□□□□ -0.51
LINC01842-201ENST00000588275 TNFSF8P32971 234 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
LINC01842-201ENST00000588275 ZNF738Q8NE65 137 aa11.86□□□□□ -0.51
LINC01842-201ENST00000588275 TRAV12-2A0A075B6T6 113 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 A8MTW9 85 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 F5H768 121 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
LINC01842-201ENST00000588275 NUDT3O95989 172 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 HOXB5P09067 269 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 S100A7P31151 101 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 GPR82Q96P67 336 aa11.85□□□□□ -0.51
LINC01842-201ENST00000588275 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
LINC01842-201ENST00000588275 HSPG2P98160 4391 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 CRXO43186 299 aaPredicted RBP11.84□□□□□ -0.51
LINC01842-201ENST00000588275 SLC25A6P12236 298 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 RHOBP62745 196 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 FCN2Q15485 313 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 PYDC2Q56P42 97 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 TOMM5Q8N4H5 51 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 PPP1R14DQ9NXH3 145 aa11.84□□□□□ -0.51
LINC01842-201ENST00000588275 H3BRN7 92 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 BOLA2-SMG1P6H3BVE0 249 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 PRB4P10163 310 aaPredicted RBP11.83□□□□□ -0.52
LINC01842-201ENST00000588275 HTN1P15515 57 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
LINC01842-201ENST00000588275 AP3S2P59780 193 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 RAP2BP61225 183 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 HIST1H1AQ02539 215 aaPredicted RBP11.83□□□□□ -0.52
LINC01842-201ENST00000588275 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
LINC01842-201ENST00000588275 SLIRPQ9GZT3 109 aaKnown RBP11.83□□□□□ -0.52
LINC01842-201ENST00000588275 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
LINC01842-201ENST00000588275 C16orf90A8MZG2 172 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 SFT2D2O95562 160 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 IL5P05113 134 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 AZU1P20160 251 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 TMBIM6P55061 237 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 B2MP61769 119 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 TNP2Q05952 138 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 LINC01587Q99440 93 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 KRTAP4-5Q9BYR2 181 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 HIGD1AQ9Y241 93 aa11.82□□□□□ -0.52
LINC01842-201ENST00000588275 NBDYA0A0U1RRE5 68 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 ATP5G1P05496 136 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 OR5G3P0C626 314 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 ATP5G3P48201 142 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 LRRC20Q8TCA0 184 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 BCL7BQ9BQE9 202 aa11.81□□□□□ -0.52
LINC01842-201ENST00000588275 H3BMQ9 156 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 LINC00869P0C866 280 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
LINC01842-201ENST00000588275 TSPOP30536 169 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 C6orf223Q8N319 242 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 SLC25A21Q9BQT8 299 aaPredicted RBP11.8□□□□□ -0.52
LINC01842-201ENST00000588275 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 LRP1BQ9NZR2 4599 aa11.8□□□□□ -0.52
LINC01842-201ENST00000588275 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 HYPMO75409 117 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 CCL18P55774 89 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 RRAS2P62070 204 aaPredicted RBP11.79□□□□□ -0.52
LINC01842-201ENST00000588275 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC01842-201ENST00000588275 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
LINC01842-201ENST00000588275 SSSCA1O60232 199 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 ADAP1O75689 374 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 CXCL3P19876 107 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 CLINT1Q14677 625 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 RNF141Q8WVD5 230 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
LINC01842-201ENST00000588275 CBY3A6NI87 242 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 CCNKO75909 580 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 TAS2R60P59551 318 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 PSG3Q16557 428 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 TMEM256Q8N2U0 113 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 ARL6Q9H0F7 186 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms