RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PLXNB2O15031 1838 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 ECM29Q5VYK3 1845 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 ARFGEF3Q5TH69 2177 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 MYH3P11055 1940 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 ALPK3Q96L96 1907 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 AKAP11Q9UKA4 1901 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 PRUNE2Q8WUY3 3088 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 MED12LQ86YW9 2145 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 TTC28Q96AY4 2481 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 IGKV2-40A0A087WW87 121 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 TRAV26-2A0A0B4J265 109 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM210A6NLX4 147 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 KPNA3O00505 521 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 ATP5HO75947 161 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 IGKV2D-40P01614 121 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 CTXN2P0C2S0 81 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 AP3S2P59780 193 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 UNQ6190/PRO20217Q6UXQ8 127 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 MIR17HGQ75NE6 70 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 Q8N2B8 174 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 PFN4Q8NHR9 129 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 H1FXQ92522 213 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 TOMM6Q96B49 74 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 CHMP6Q96FZ7 201 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 RETNLBQ9BQ08 111 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 SLC22A13Q9Y226 551 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 SOX21Q9Y651 276 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 PLIN4Q96Q06 1357 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 ZNF236Q9UL36 1845 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 XIRP2A4UGR9 3374 aa1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 KIAA0100Q14667 2235 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-205ENST00000581383 MICAL3Q7RTP6 2002 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 CHD9Q3L8U1 2897 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 TRAV9-1A0A075B6T8 112 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 FAM236DA0A1B0GTK5 79 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 SMIM9A6NGZ8 99 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 TTRP02766 147 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 IFNA6P05013 189 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 HTR1AP08908 422 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 ARL14EPLP0DKL9 152 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 FAM236CP0DP71 79 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 FKBP2P26885 142 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 ERVS71-1P61550 626 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 SRSF6Q13247 344 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 ZNF846Q147U1 533 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 TERB2Q8NHR7 220 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 DGCR14Q96DF8 476 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 COL4A6Q14031 1691 aa1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 LAMA2P24043 3122 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-205ENST00000581383 CCDC171Q6TFL3 1326 aa1.4□□□□□ -2.18
SMCHD1-205ENST00000581383 CHD7Q9P2D1 2997 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 IGKV3-7A0A075B6H7 116 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 IGKV1D-42A0A075B6H8 117 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 CNIH1O95406 144 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 SMIM10L2AP0DMW4 78 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 SMIM10L2BP0DMW5 78 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 CRYGAP11844 174 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 HOXA6P31267 233 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 CCL7P80098 99 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 PRAP1Q96NZ9 151 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 SERPINI1Q99574 410 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 REG4Q9BYZ8 158 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 MED9Q9NWA0 146 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 GINS2Q9Y248 185 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 PTPRFP10586 1907 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 MYH13Q9UKX3 1938 aa1.4□□□□□ -2.19
SMCHD1-205ENST00000581383 DIDO1Q9BTC0 2240 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 MYH2Q9UKX2 1941 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 A0A087WUJ7 227 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 BUB1B-PAK6H3BSN5 160 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 PIRO00625 290 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 FADS1O60427 444 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 OR5F1O95221 314 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 IFNA10P01566 189 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 SPI1P17947 270 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 CD52P31358 61 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 REEP5Q00765 189 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 KHDC3LQ587J8 217 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 C10orf55Q5SWW7 151 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 DPPA3Q6W0C5 159 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 S100A7AQ86SG5 101 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 LINC00471Q8N535 108 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 OR5A1Q8NGJ0 315 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 CMSS1Q9BQ75 279 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 DCSTAMPQ9H295 470 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 PSTPIP2Q9H939 334 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 SLC39A9Q9NUM3 307 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 GLTPQ9NZD2 209 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 ERGIC3Q9Y282 383 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 ZFHX4Q86UP3 3567 aa1.39□□□□□ -2.19
SMCHD1-205ENST00000581383 BDP1A6H8Y1 2624 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 FOCADQ5VW36 1801 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 CACNA1BQ00975 2339 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 DNAH12Q6ZR08 3092 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 MGAMO43451 1857 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 TRAV14DV4A0A0A6YYC5 116 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 HSD11B1P28845 292 aa1.38□□□□□ -2.19
SMCHD1-205ENST00000581383 G6PCP35575 357 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms