RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CD5LO43866 347 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 LAMA1P25391 3075 aa8.52□□□□□ -1.04
USB1-212ENST00000566082 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 SSBP2P81877 361 aaPredicted RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 BSPH1Q075Z2 132 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 Q6AWC8 147 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 SLC25A39Q9BZJ4 359 aaPredicted RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 RALYQ9UKM9 306 aaKnown RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 NPIPB5A8MRT5 1133 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 LYNX1G3V0Z9 82 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 LYNX1P0DP58 116 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 EVI2AP22794 236 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 SFTA2Q6UW10 78 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 TP53TG3Q9ULZ0 132 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.52□□□□□ -1.055e-7■□□□□ 8.1
USB1-212ENST00000566082 GOSR1O95249 250 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 TOMM40O96008 361 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 RPS20P60866 119 aaKnown RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 KLF17Q5JT82 389 aaPredicted RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 ZNF788Q6ZQV5 615 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
USB1-212ENST00000566082 COLQQ9Y215 455 aaPredicted RBP8.52□□□□□ -1.05
USB1-212ENST00000566082 SMKR1H3BMG3 65 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 SP9P0CG40 484 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 LEPP41159 167 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 LYZL1Q6UWQ5 148 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 IGLC7A0M8Q6 106 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 FAM231BA6NCW3 169 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 PROP1O75360 226 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 ZNF883P0CG24 379 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 DLX1P56177 255 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 HSD52Q0P140 79 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 TMEM133Q9H2Q1 129 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 NDUFA4L2Q9NRX3 87 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 RABAC1Q9UI14 185 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 IGKV1OR2-108A0A075B7D4 117 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 A0A1B0GW15 77 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 P0C879 139 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 CFHR2P36980 270 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 PSMB2P49721 201 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 KIR3DS1Q14943 382 aa8.51□□□□□ -1.05
USB1-212ENST00000566082 ZGRF1Q86YA3 2104 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 Q86TA4 180 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 TTC9CQ8N5M4 171 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 RAB1BQ9H0U4 201 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 SAMD13Q5VXD3 122 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 OR4X2Q8NGF9 303 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 TRGV9Q99603 122 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 ESDP10768 282 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 FXYD5Q96DB9 178 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
USB1-212ENST00000566082 IGKV2-40A0A087WW87 121 aaPredicted RBP8.49□□□□□ -1.05
USB1-212ENST00000566082 IGKV2D-40P01614 121 aaPredicted RBP8.49□□□□□ -1.05
USB1-212ENST00000566082 DIAPH2-AS1Q14236 149 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 SPRNQ5BIV9 151 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 BCL6BQ8N143 479 aaPredicted RBP8.49□□□□□ -1.05
USB1-212ENST00000566082 Q8TAT8 98 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 C21orf62Q9NYP8 219 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 TP73-AS1Q9UF72 201 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 NDUFA3O95167 84 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 CD59P13987 128 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 Q5PR19 223 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 RPRMLQ8N4K4 120 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 C1RLQ9NZP8 487 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 A0A1B0GWB2 263 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 H7C2G1 150 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 ZNF474Q6S9Z5 364 aaPredicted RBP8.49□□□□□ -1.05
USB1-212ENST00000566082 LYPD2Q6UXB3 125 aa8.49□□□□□ -1.05
USB1-212ENST00000566082 IGHV2-70DA0A0C4DH43 119 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 TMEM213A2RRL7 107 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 IGFL4Q6B9Z1 124 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 GTSCR1Q86UQ5 136 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 PTPRSQ13332 1948 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 M0R381 172 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 PRSS57Q6UWY2 283 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 OR9G4Q8NGQ1 327 aa8.48□□□□□ -1.05
USB1-212ENST00000566082 HCFC1P51610 2035 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 CPAMD8Q8IZJ3 1885 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 UTF1Q5T230 341 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 CELSR3Q9NYQ7 3312 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms