RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IFNA21P01568 189 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 IL5P05113 134 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 BAK1Q16611 211 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 RRN3P1Q2M238 152 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 TRIQKQ629K1 86 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 CYP2G1PQ6ZSU1 146 aa16.11■□□□□ 0.17
ACTN1-220ENST00000556433 RBM38Q9H0Z9 239 aaKnown RBP16.11■□□□□ 0.17
ACTN1-220ENST00000556433 LINC00854A0A1B0GVQ3 168 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 A8MTW9 85 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 FGL1Q08830 312 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 IGFL4Q6B9Z1 124 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 AMTNQ6UX39 209 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 FAM210BQ96KR6 192 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 TMEM208Q9BTX3 173 aa16.1■□□□□ 0.17
ACTN1-220ENST00000556433 YTHDF2Q9Y5A9 579 aaKnown RBP16.1■□□□□ 0.17
ACTN1-220ENST00000556433 SSSCA1O60232 199 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 OR4E1P0C645 316 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 RAP2BP61225 183 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 LINC00336Q6ZUF6 198 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 SMIM8Q96KF7 97 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 IGF2BP2-AS1Q96M15 143 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 SLC25A39Q9BZJ4 359 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-220ENST00000556433 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
ACTN1-220ENST00000556433 TRAV8-2A0A0B4J237 113 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 PMS2P5A8MQ11 134 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 H3BRN7 92 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 HYPMO75409 117 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 DUSP14O95147 198 aaKnown RBP16.08■□□□□ 0.16
ACTN1-220ENST00000556433 HTN3P15516 51 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 CNN1P51911 297 aaKnown RBP16.08■□□□□ 0.16
ACTN1-220ENST00000556433 RNF182Q8N6D2 247 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 SHANK2-AS3Q9BTD1 123 aa16.08■□□□□ 0.16
ACTN1-220ENST00000556433 HECTD4Q9Y4D8 3996 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 HERC2O95714 4834 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 ZNF701M0R085 212 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-220ENST00000556433 M0R2N4 97 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 CCNKO75909 580 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 RRAS2P62070 204 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-220ENST00000556433 OXA1LQ15070 435 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 C4orf46Q504U0 113 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 OR11H7Q8NGC8 314 aa16.07■□□□□ 0.16
ACTN1-220ENST00000556433 OR5G3P0C626 314 aa16.06■□□□□ 0.16
ACTN1-220ENST00000556433 LINC00869P0C866 280 aa16.06■□□□□ 0.16
ACTN1-220ENST00000556433 RPL7P18124 248 aaKnown RBP16.06■□□□□ 0.16
ACTN1-220ENST00000556433 ANXA7P20073 488 aaKnown RBP16.06■□□□□ 0.16
ACTN1-220ENST00000556433 SELENOTP62341 195 aa16.06■□□□□ 0.16
ACTN1-220ENST00000556433 SPINK13Q1W4C9 94 aa16.06■□□□□ 0.16
ACTN1-220ENST00000556433 CENPXA8MT69 81 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 M0R2Z0 102 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 SCGB1D2O95969 90 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 METTL15P1P0C7V9 234 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 PLP1P60201 277 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 DAD1P61803 113 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 DLK1P80370 383 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 TMEM14EPQ6UXP3 125 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 UBE2DNLQ8IWF7 75 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 ZNF738Q8NE65 137 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 NPVFQ9HCQ7 196 aa16.05■□□□□ 0.16
ACTN1-220ENST00000556433 ZNF705GA8MUZ8 300 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-220ENST00000556433 IAH1Q2TAA2 248 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-220ENST00000556433 OR10P1Q8NGE3 313 aa16.04■□□□□ 0.16
ACTN1-220ENST00000556433 UHRF2Q96PU4 802 aa16.04■□□□□ 0.16
ACTN1-220ENST00000556433 SDHCQ99643 169 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-220ENST00000556433 GSKIPQ9P0R6 139 aa16.04■□□□□ 0.16
ACTN1-220ENST00000556433 CRXO43186 299 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-220ENST00000556433 INSP01308 110 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 PRM2P04554 102 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 S100A7AQ86SG5 101 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 LRRC20Q8TCA0 184 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 ARL6Q9H0F7 186 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 MGAT4CQ9UBM8 478 aa16.03■□□□□ 0.16
ACTN1-220ENST00000556433 FNDC10F2Z333 226 aa16.02■□□□□ 0.16
ACTN1-220ENST00000556433 BTCP35070 178 aa16.02■□□□□ 0.16
ACTN1-220ENST00000556433 LGALS9BQ3B8N2 356 aa16.02■□□□□ 0.16
ACTN1-220ENST00000556433 TEPPQ6URK8 271 aa16.02■□□□□ 0.16
ACTN1-220ENST00000556433 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.16
ACTN1-220ENST00000556433 DNAH17Q9UFH2 4485 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 TAS2R30P59541 319 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 B2MP61769 119 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 RHOBP62745 196 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 SLC38A11Q08AI6 406 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 TMEM88Q6PEY1 159 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 PATE2Q6UY27 113 aa16.01■□□□□ 0.15
ACTN1-220ENST00000556433 IGLV2-18A0A075B6J9 118 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 TRAV12-2A0A075B6T6 113 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 A0A087X0K7 114 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 RTL8CO15255 209 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 TSC22D2O75157 780 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 CXCL3P19876 107 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 HIST1H1AQ02539 215 aaPredicted RBP16■□□□□ 0.15
ACTN1-220ENST00000556433 PSG3Q16557 428 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 BAP18Q8IXM2 172 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 OR8A1Q8NGG7 326 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 MITD1Q8WV92 249 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 ARV1Q9H2C2 271 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 PPP1R14DQ9NXH3 145 aa16■□□□□ 0.15
ACTN1-220ENST00000556433 PRSS29PA6NIE9 313 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 BOLA2-SMG1P6H3BVE0 249 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 K7EPK0 472 aa15.99■□□□□ 0.15
ACTN1-220ENST00000556433 GOSR2O14653 212 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms