RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ESDP10768 282 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 CX3CL1P78423 397 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 LY6EQ16553 131 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 C10orf55Q5SWW7 151 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 TMEM86BQ8N661 226 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 CHRDL1Q9BU40 450 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
SHOX-204ENST00000554971 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
SHOX-204ENST00000554971 FAM231DQ6ZW35 169 aa13.65□□□□□ -0.22
SHOX-204ENST00000554971 TRRAPQ9Y4A5 3859 aa13.65□□□□□ -0.22
SHOX-204ENST00000554971 DNHD1Q96M86 4753 aa13.65□□□□□ -0.22
SHOX-204ENST00000554971 SLC17A3O00476 420 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 RNASE1P07998 156 aaKnown RBP13.64□□□□□ -0.23
SHOX-204ENST00000554971 DEFA6Q01524 100 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 Q0VG73 95 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
SHOX-204ENST00000554971 IGLV2-8P01709 118 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 ADMP35318 185 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 IQCJQ1A5X6 159 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 RASL11AQ6T310 242 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 RITA1Q96K30 269 aa13.64□□□□□ -0.23
SHOX-204ENST00000554971 MRPL18Q9H0U6 180 aaKnown RBP13.64□□□□□ -0.23
SHOX-204ENST00000554971 SMIM27A0A1W2PRY6 76 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 A6NDX4 124 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 RANP62826 216 aaKnown RBP13.63□□□□□ -0.23
SHOX-204ENST00000554971 TNXAQ16473 311 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 IBA57Q5T440 356 aaKnown RBP13.63□□□□□ -0.23
SHOX-204ENST00000554971 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 FXYD5Q96DB9 178 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 JMJD8Q96S16 334 aa13.63□□□□□ -0.23
SHOX-204ENST00000554971 F11RQ9Y624 299 aaKnown RBP13.63□□□□□ -0.23
SHOX-204ENST00000554971 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 BRS3P32247 399 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 MYCNOSP40205 109 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 OR5I1Q13606 314 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 TPSG1Q9NRR2 321 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 FCN1O00602 326 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 PEX7O00628 323 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 HYPMO75409 117 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 CRISP2P16562 243 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 SSBP2P81877 361 aaPredicted RBP13.62□□□□□ -0.23
SHOX-204ENST00000554971 EBI3Q14213 229 aa13.62□□□□□ -0.23
SHOX-204ENST00000554971 FAM209BQ5JX69 171 aa13.61□□□□□ -0.23
SHOX-204ENST00000554971 MORN5Q5VZ52 161 aa13.61□□□□□ -0.23
SHOX-204ENST00000554971 OR8I2Q8N0Y5 310 aa13.61□□□□□ -0.23
SHOX-204ENST00000554971 Q8N6K4 173 aa13.61□□□□□ -0.23
SHOX-204ENST00000554971 MISP3Q96FF7 219 aa13.61□□□□□ -0.23
SHOX-204ENST00000554971 CBLN1P23435 193 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 DDTP30046 118 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 TMEM183BQ1AE95 376 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 CMTM2Q8TAZ6 248 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 MRPL36Q9P0J6 103 aaKnown RBP13.6□□□□□ -0.23
SHOX-204ENST00000554971 KLF12Q9Y4X4 402 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 VWFP04275 2813 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 IZUMO1RA6ND01 250 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 TEX22C9J3V5 150 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 HLA-DQA1P01909 254 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 TPPP2P59282 170 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 KRTAP24-1Q3LI83 254 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 BAGE2Q86Y30 109 aa13.6□□□□□ -0.23
SHOX-204ENST00000554971 RBM14Q96PK6 669 aaKnown RBP13.6□□□□□ -0.23
SHOX-204ENST00000554971 SNURFLB1AK76 121 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 AMY1AP04745 511 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 FAM106CPP0CH98 169 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 PYYP10082 97 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 MFAP2P55001 183 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 HES1Q14469 280 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 C9orf152Q5JTZ5 239 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 WIPF2Q8TF74 440 aaPredicted RBP13.59□□□□□ -0.23
SHOX-204ENST00000554971 RNASE7Q9H1E1 156 aaKnown RBP13.59□□□□□ -0.23
SHOX-204ENST00000554971 EPDR1Q9UM22 224 aa13.59□□□□□ -0.23
SHOX-204ENST00000554971 REG1AP05451 166 aa13.58□□□□□ -0.23
SHOX-204ENST00000554971 MGST1P10620 155 aaKnown RBP13.58□□□□□ -0.23
SHOX-204ENST00000554971 RIPPLY3P57055 190 aa13.58□□□□□ -0.23
SHOX-204ENST00000554971 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.23
SHOX-204ENST00000554971 REC114Q7Z4M0 266 aa13.58□□□□□ -0.23
SHOX-204ENST00000554971 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.23
SHOX-204ENST00000554971 ZNF705GA8MUZ8 300 aaPredicted RBP13.58□□□□□ -0.24
SHOX-204ENST00000554971 NBEAP1P0C6P0 100 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 CNTFRP26992 372 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 RAB4BP61018 213 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 LBHQ53QV2 105 aaPredicted RBP13.58□□□□□ -0.24
SHOX-204ENST00000554971 TMEM256Q8N2U0 113 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.58□□□□□ -0.24
SHOX-204ENST00000554971 OR1B1Q8NGR6 318 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
SHOX-204ENST00000554971 MS4A10Q96PG2 267 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 TMEM14CQ9P0S9 112 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 RNF24Q9Y225 148 aa13.58□□□□□ -0.24
SHOX-204ENST00000554971 MOSP00540 346 aa13.57□□□□□ -0.24
SHOX-204ENST00000554971 HIST1H1EP10412 219 aaKnown RBP13.57□□□□□ -0.24
SHOX-204ENST00000554971 TMEM11P17152 192 aa13.57□□□□□ -0.24
SHOX-204ENST00000554971 ORM2P19652 201 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms