RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C5orf24Q7Z6I8 188 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 DEFB104AQ8WTQ1 72 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 E9PLN8 166 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 LYZL1Q6UWQ5 148 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 EDA2RQ9HAV5 297 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 ZNF664Q8N3J9 261 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 TOMM40O96008 361 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 Q0VFX4 171 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 Q6ZRM9 215 aa11.42□□□□□ -0.58
VTI1B-204ENST00000554659 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 PAX4O43316 350 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 LILRA1O75019 489 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
VTI1B-204ENST00000554659 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 ABCA7Q8IZY2 2146 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 SYS1-DBNDD2H3BUS1 97 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 CADP27708 2225 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 ZSWIM8A7E2V4 1837 aa11.41□□□□□ -0.58
VTI1B-204ENST00000554659 CSRP1P21291 193 aaKnown RBP11.41□□□□□ -0.58
VTI1B-204ENST00000554659 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
VTI1B-204ENST00000554659 C9JQL5 133 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 SRD5A1P18405 259 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 GAGE12BA1L429 117 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 PSG3Q16557 428 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 GAFA1Q96PS6 74 aa11.4□□□□□ -0.58
VTI1B-204ENST00000554659 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.59
VTI1B-204ENST00000554659 CD59P13987 128 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 Q0VG73 95 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 C15orf32Q32M92 178 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF876PQ49A33 203 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 WNT2P09544 360 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 SPINK8P0C7L1 97 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF672Q499Z4 452 aaPredicted RBP11.39□□□□□ -0.59
VTI1B-204ENST00000554659 MDS2Q8NDY4 140 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 SH2D1AO60880 128 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
VTI1B-204ENST00000554659 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 PLEKHB2Q96CS7 222 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ITGB1BP1O14713 200 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 RPL15P61313 204 aaKnown RBP11.39□□□□□ -0.59
VTI1B-204ENST00000554659 BMPERQ8N8U9 685 aa11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF625Q96I27 306 aaPredicted RBP11.39□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF138P52744 262 aa11.38□□□□□ -0.59
VTI1B-204ENST00000554659 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
VTI1B-204ENST00000554659 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
VTI1B-204ENST00000554659 CACNA1EQ15878 2313 aa11.38□□□□□ -0.59
VTI1B-204ENST00000554659 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
VTI1B-204ENST00000554659 ZC2HC1BQ5TFG8 222 aa11.38□□□□□ -0.59
VTI1B-204ENST00000554659 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 ETV2O00321 342 aaPredicted RBP11.37□□□□□ -0.59
VTI1B-204ENST00000554659 C9orf139Q6ZV77 190 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
VTI1B-204ENST00000554659 SBF1O95248 1867 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 SPTBN2O15020 2390 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 PFN1P07737 140 aaKnown RBP11.37□□□□□ -0.59
VTI1B-204ENST00000554659 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
VTI1B-204ENST00000554659 IGHV3-73A0A0B4J1V6 119 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 IGKV1-6A0A0C4DH72 117 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 C3orf36Q3SXR2 165 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 A8MWP6 167 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 C5orf64Q2M2E5 130 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 ADAMTSL5Q6ZMM2 481 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 C20orf144Q9BQM9 153 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF415Q09FC8 603 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 Q86TA4 180 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 CACNA1GO43497 2377 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF474Q6S9Z5 364 aaPredicted RBP11.36□□□□□ -0.59
VTI1B-204ENST00000554659 C1orf147Q96MC9 270 aaPredicted RBP11.36□□□□□ -0.59
VTI1B-204ENST00000554659 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
VTI1B-204ENST00000554659 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
VTI1B-204ENST00000554659 BUB1B-PAK6H3BSN5 160 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 CD5LO43866 347 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 A0A087WX48 190 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 MBD3L4A6NDZ8 208 aaPredicted RBP11.35□□□□□ -0.59
VTI1B-204ENST00000554659 MBD3L3A6NE82 208 aaPredicted RBP11.35□□□□□ -0.59
VTI1B-204ENST00000554659 MBD3L5A6NJ08 208 aaPredicted RBP11.35□□□□□ -0.59
VTI1B-204ENST00000554659 EREGO14944 169 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 MBD3L2Q8NHZ7 208 aaPredicted RBP11.35□□□□□ -0.59
VTI1B-204ENST00000554659 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 M0R1W7 72 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms