RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MSRB2Q9Y3D2 182 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 IGHV3-21A0A0B4J1V1 117 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 FAM90A27PA6NNH2 459 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 HSBP1L1C9JCN9 74 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-223ENST00000544669 EBI3Q14213 229 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-223ENST00000544669 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 Q6ZN92 141 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 PLCE1Q9P212 2302 aa10.31□□□□□ -0.76
CPSF7-223ENST00000544669 LEPROTL1O95214 131 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 IL4P05112 153 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 ARF6P62330 175 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 COX8CQ7Z4L0 72 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 ARPC1AQ92747 370 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 ZNF414Q96IQ9 312 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 IGLV11-55A0A075B6I3 123 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 LYNX1G3V0Z9 82 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 APELAP0DMC3 54 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 LYNX1P0DP58 116 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 ZNF25P17030 456 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-223ENST00000544669 HES1Q14469 280 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-223ENST00000544669 C21orf62Q9NYP8 219 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 LAMTOR2Q9Y2Q5 125 aa10.3□□□□□ -0.76
CPSF7-223ENST00000544669 C2orf70A6NJV1 201 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 VWC2LB2RUY7 222 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 NDUFB8O95169 186 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 BMI1P35226 326 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 ZNF124Q15973 351 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 RUSC1-AS1Q66K80 236 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 LINC00322Q6ZN03 302 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-223ENST00000544669 EXOC3-AS1Q8N2X6 119 aa10.29□□□□□ -0.76
CPSF7-223ENST00000544669 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-223ENST00000544669 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 Q56UQ5 140 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 GSX1Q9H4S2 264 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-223ENST00000544669 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 COL6A3P12111 3177 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
CPSF7-223ENST00000544669 DLEU1O43261 78 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 APOHP02749 345 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-223ENST00000544669 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
CPSF7-223ENST00000544669 EBLN2Q6P2I7 272 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
CPSF7-223ENST00000544669 EP300Q09472 2414 aaPredicted RBP10.27□□□□□ -0.76
CPSF7-223ENST00000544669 SYS1-DBNDD2H3BUS1 97 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 C11orf71Q6IPW1 123 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 DTX2Q86UW9 622 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 LPAR2Q9HBW0 351 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 RABAC1Q9UI14 185 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 GOLT1BQ9Y3E0 138 aa10.27□□□□□ -0.77
CPSF7-223ENST00000544669 TSPOP30536 169 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 Q8N6K4 173 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 ZC2HC1AQ96GY0 325 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 CUL9Q8IWT3 2517 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
CPSF7-223ENST00000544669 H3BTX0 84 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 SFTPCP11686 197 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 VMO1Q7Z5L0 202 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 AP5S1Q9NUS5 200 aa10.26□□□□□ -0.77
CPSF7-223ENST00000544669 TRAV8-1A0A0A6YYK1 113 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 SIAH2O43255 324 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 TMEM11P17152 192 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 BATFQ16520 125 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 ATP6V0BQ99437 205 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 ICE1Q9Y2F5 2266 aa10.25□□□□□ -0.77
CPSF7-223ENST00000544669 OR10AG1Q8NH19 301 aa10.24□□□□□ -0.77
CPSF7-223ENST00000544669 PRSS3P2Q8NHM4 247 aa10.24□□□□□ -0.77
CPSF7-223ENST00000544669 ORAOV1Q8WV07 137 aa10.24□□□□□ -0.77
CPSF7-223ENST00000544669 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
CPSF7-223ENST00000544669 A6NNC1 897 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 TOX4O94842 621 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 GOSR1O95249 250 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 G0S2P27469 103 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 UBE2E1P51965 193 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 DLX1P56177 255 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 ADORA2A-AS1P86434 159 aa10.23□□□□□ -0.77
CPSF7-223ENST00000544669 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms