RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 STAG3L3P0CL85 134 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 SULT1A2P50226 295 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 RAB5CP51148 216 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 RHOBP62745 196 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 ZNF726P1Q15940 193 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 BEAN1Q3B7T3 259 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 CD300EQ496F6 205 aaPredicted RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 TMEM41BQ5BJD5 291 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 OXLD1Q5BKU9 147 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 MORN5Q5VZ52 161 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 EIF5AL1Q6IS14 154 aaKnown RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 DPPA3Q6W0C5 159 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 TCF24Q7RTU0 167 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 STXBP6Q8NFX7 210 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 OR10G4Q8NGN3 311 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 OR10G9Q8NGN4 311 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 OR10G7Q8NGN6 311 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 MBD3L1Q8WWY6 194 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 SAT2Q96F10 170 aaPredicted RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 ZNF503Q96F45 646 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 GRAMD2BQ96HH9 432 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 NARS2Q96I59 477 aaKnown RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 DOK5Q9P104 306 aa4.41□□□□□ -1.7
ABCF1-207ENST00000542772 ZMAT5Q9UDW3 170 aaKnown RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 ZNF256Q9Y2P7 627 aaPredicted RBP4.41□□□□□ -1.7
ABCF1-207ENST00000542772 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 A0A087X0K7 114 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 IGHV3-49A0A0A0MS15 119 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 A0A1W2PPV4 95 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 IZUMO1RA6ND01 250 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF253O75346 499 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 IGLC2P0DOY2 106 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 HIST1H1EP10412 219 aaKnown RBP4.4□□□□□ -1.71
ABCF1-207ENST00000542772 RPL7P18124 248 aaKnown RBP4.4□□□□□ -1.71
ABCF1-207ENST00000542772 CMC4P56277 68 aaPredicted RBP4.4□□□□□ -1.71
ABCF1-207ENST00000542772 RAB2AP61019 212 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 PMS2P11Q13670 270 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 KPRPQ5T749 579 aaPredicted RBP4.4□□□□□ -1.71
ABCF1-207ENST00000542772 SPATA31B1PQ5VZV4 182 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 TEX261Q6UWH6 196 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 SIGLEC15Q6ZMC9 328 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 MIR17HGQ75NE6 70 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 OR8I2Q8N0Y5 310 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 DCANP1Q8TF63 244 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 RAB24Q969Q5 203 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 SCRT1Q9BWW7 348 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 SLC25A2Q9BXI2 301 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 ACTR3CQ9C0K3 210 aaPredicted RBP4.4□□□□□ -1.71
ABCF1-207ENST00000542772 OR51M1Q9H341 326 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 HRH4Q9H3N8 390 aa4.4□□□□□ -1.71
ABCF1-207ENST00000542772 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 CTXND1A0A1B0GTU2 59 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 G3V4G9 280 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 H3BQ15 152 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 K7EQG2 157 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 SOCS3O14543 225 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 NBEAP1P0C6P0 100 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 GP9P14770 177 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 GALR1P47211 349 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 CDC34P49427 236 aaPredicted RBP4.39□□□□□ -1.71
ABCF1-207ENST00000542772 MEOX2P50222 304 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 TAS2R45P59539 299 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 PAFAH1B2P68402 229 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 GUK1Q16774 197 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 AKR1C8PQ5T2L2 129 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 LEMD1Q68G75 181 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 LCN12Q6JVE5 192 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 RBPMS2Q6ZRY4 209 aaKnown RBP4.39□□□□□ -1.71
ABCF1-207ENST00000542772 SSX7Q7RTT5 188 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 Q8N1Y9 231 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 LYPD1Q8N2G4 141 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 ARL6IP6Q8N6S5 226 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF680Q8NEM1 530 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 LYPD6BQ8NI32 183 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 RNF141Q8WVD5 230 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
ABCF1-207ENST00000542772 MS4A6AQ9H2W1 248 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 SLC25A22Q9H936 323 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 C19orf73Q9NVV2 129 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF586Q9NXT0 402 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 CLEC5AQ9NY25 188 aa4.39□□□□□ -1.71
ABCF1-207ENST00000542772 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 TRAV8-2A0A0B4J237 113 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 NDUFB4O95168 129 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 CXorf1O96002 111 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 FHITP49789 147 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 IFITM2Q01629 132 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms