RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 EMP1P54849 157 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 ZNF672Q499Z4 452 aaPredicted RBP11.74□□□□□ -0.53
GCFC2-211ENST00000541687 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 NBR2O15453 112 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 GPX1P07203 203 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 COL8A2P25067 703 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 SMIM13P0DJ93 91 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 SCGB1A1P11684 91 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
GCFC2-211ENST00000541687 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 MSMPQ1L6U9 139 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 TSKUQ8WUA8 353 aa11.74□□□□□ -0.53
GCFC2-211ENST00000541687 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
GCFC2-211ENST00000541687 LRP4O75096 1905 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 C1orf194Q5T5A4 169 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 ARPC1AQ92747 370 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 SPCS1Q9Y6A9 102 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 DYSFO75923 2080 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 TTC32Q5I0X7 151 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 TTC9CQ8N5M4 171 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 A8MWP6 167 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
GCFC2-211ENST00000541687 E7EQL1 145 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 UTF1Q5T230 341 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 F2Z2F3 143 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 C3orf79P0CE67 100 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 LGALS3P17931 250 aaKnown RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 IGFL4Q6B9Z1 124 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 EBLN2Q6P2I7 272 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 FOXC2Q99958 501 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 POLR3KQ9Y2Y1 108 aaPredicted RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 LINC00614P0C842 121 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 SSBP2P81877 361 aaPredicted RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
GCFC2-211ENST00000541687 SIGLEC9Q9Y336 463 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 PSMB11A5LHX3 300 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 ID1P41134 155 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 Q8TCH9 128 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
GCFC2-211ENST00000541687 TCRAP04437 139 aa11.71□□□□□ -0.53
GCFC2-211ENST00000541687 FXYD7P58549 80 aa11.71□□□□□ -0.53
GCFC2-211ENST00000541687 UNQ6494/PRO21346Q6UXR6 183 aa11.71□□□□□ -0.53
GCFC2-211ENST00000541687 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
GCFC2-211ENST00000541687 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.53
GCFC2-211ENST00000541687 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
GCFC2-211ENST00000541687 K7EN84 100 aa11.71□□□□□ -0.54
GCFC2-211ENST00000541687 CLEC19AQ6UXS0 136 aa11.71□□□□□ -0.54
GCFC2-211ENST00000541687 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.54
GCFC2-211ENST00000541687 NDUFA4L2Q9NRX3 87 aa11.71□□□□□ -0.54
GCFC2-211ENST00000541687 CEP192Q8TEP8 1941 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 NPIPB6E9PJ23 425 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 SFTPCP11686 197 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 ZNF56Q15929 161 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 CENPVQ7Z7K6 275 aaPredicted RBP11.7□□□□□ -0.54
GCFC2-211ENST00000541687 NUP37Q8NFH4 326 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
GCFC2-211ENST00000541687 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
GCFC2-211ENST00000541687 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 SAPCD1Q5SSQ6 148 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 DDB2Q92466 427 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 SETD2Q9BYW2 2564 aaPredicted RBP11.7□□□□□ -0.54
GCFC2-211ENST00000541687 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
GCFC2-211ENST00000541687 NPIPB5A8MRT5 1133 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 PROP1O75360 226 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 CFHR2P36980 270 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 GATA4P43694 442 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 PSG9Q00887 426 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
GCFC2-211ENST00000541687 NUPR1O60356 82 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 Q6ZWC4 215 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 ZNF329Q86UD4 541 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 V9GYV3 84 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 UCNP55089 124 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 DAZAP2Q15038 168 aaPredicted RBP11.69□□□□□ -0.54
GCFC2-211ENST00000541687 VKORC1Q9BQB6 163 aa11.69□□□□□ -0.54
GCFC2-211ENST00000541687 IGKV2-40A0A087WW87 121 aaPredicted RBP11.68□□□□□ -0.54
GCFC2-211ENST00000541687 BUB1B-PAK6H3BSN5 160 aa11.68□□□□□ -0.54
GCFC2-211ENST00000541687 IGKV2D-40P01614 121 aaPredicted RBP11.68□□□□□ -0.54
GCFC2-211ENST00000541687 KLRB1Q12918 225 aa11.68□□□□□ -0.54
GCFC2-211ENST00000541687 LAMA1P25391 3075 aa11.68□□□□□ -0.54
GCFC2-211ENST00000541687 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
GCFC2-211ENST00000541687 LOXP28300 417 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms