RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TMEM37Q8WXS4 190 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
CTSB-229ENST00000533572 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
CTSB-229ENST00000533572 SPP1P10451 314 aa12.96□□□□□ -0.33
CTSB-229ENST00000533572 RPL7P18124 248 aaKnown RBP12.96□□□□□ -0.33
CTSB-229ENST00000533572 RHOBP62745 196 aa12.96□□□□□ -0.33
CTSB-229ENST00000533572 PAFAH1B2P68402 229 aa12.96□□□□□ -0.33
CTSB-229ENST00000533572 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.33
CTSB-229ENST00000533572 MLXQ9UH92 298 aa12.96□□□□□ -0.33
CTSB-229ENST00000533572 IGHV3-49A0A0A0MS15 119 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 APOHP02749 345 aaPredicted RBP12.95□□□□□ -0.34
CTSB-229ENST00000533572 GALR1P47211 349 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 FAM78BQ5VT40 261 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 SAMD13Q5VXD3 122 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 TCF24Q7RTU0 167 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 SLC25A32Q9H2D1 315 aa12.95□□□□□ -0.34
CTSB-229ENST00000533572 TRAV2A0A0B4J234 112 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 A0A1W2PPV4 95 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 UMAD1C9J7I0 102 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 TSPAN4O14817 238 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 MEOX2P50222 304 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 TAS2R45P59539 299 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 CD300EQ496F6 205 aaPredicted RBP12.94□□□□□ -0.34
CTSB-229ENST00000533572 AKR1C8PQ5T2L2 129 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 SIGLEC15Q6ZMC9 328 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 BPIFA4PQ86YQ2 179 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 ASCL2Q99929 193 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
CTSB-229ENST00000533572 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 NBEAL2Q6ZNJ1 2754 aa12.94□□□□□ -0.34
CTSB-229ENST00000533572 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 IGHV3-66A0A0C4DH42 116 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 EDN2P20800 178 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 RPL11P62913 178 aaKnown RBP12.93□□□□□ -0.34
CTSB-229ENST00000533572 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 OR10G9Q8NGN4 311 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 SLC25A22Q9H936 323 aa12.93□□□□□ -0.34
CTSB-229ENST00000533572 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
CTSB-229ENST00000533572 NKX2-5P52952 324 aaPredicted RBP12.92□□□□□ -0.34
CTSB-229ENST00000533572 GUCA2BQ16661 112 aa12.92□□□□□ -0.34
CTSB-229ENST00000533572 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
CTSB-229ENST00000533572 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
CTSB-229ENST00000533572 SCRT1Q9BWW7 348 aa12.92□□□□□ -0.34
CTSB-229ENST00000533572 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 OR4C46A6NHA9 309 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 RAB5CP51148 216 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 CMC4P56277 68 aaPredicted RBP12.91□□□□□ -0.34
CTSB-229ENST00000533572 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 DPPA3Q6W0C5 159 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 ACTR3CQ9C0K3 210 aaPredicted RBP12.91□□□□□ -0.34
CTSB-229ENST00000533572 TUBA4BQ9H853 241 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 SEPSECSQ9HD40 501 aaKnown RBP12.91□□□□□ -0.34
CTSB-229ENST00000533572 TMEM14CQ9P0S9 112 aa12.91□□□□□ -0.34
CTSB-229ENST00000533572 DNASE2O00115 360 aaPredicted RBP12.9□□□□□ -0.34
CTSB-229ENST00000533572 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
CTSB-229ENST00000533572 CDC34P49427 236 aaPredicted RBP12.9□□□□□ -0.34
CTSB-229ENST00000533572 CD81P60033 236 aa12.9□□□□□ -0.34
CTSB-229ENST00000533572 GUK1Q16774 197 aa12.9□□□□□ -0.34
CTSB-229ENST00000533572 KHDC3LQ587J8 217 aa12.9□□□□□ -0.34
CTSB-229ENST00000533572 NRN1Q9NPD7 142 aa12.9□□□□□ -0.34
CTSB-229ENST00000533572 U3KQK5 164 aa12.9□□□□□ -0.34
CTSB-229ENST00000533572 ZNF785A8K8V0 405 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 BOLA2-SMG1P6H3BVE0 249 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 RAB2AP61019 212 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 FAM122CQ6P4D5 195 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 Q8N1Y9 231 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 RPRMQ9NS64 109 aa12.89□□□□□ -0.35
CTSB-229ENST00000533572 A0A087X0K7 114 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
CTSB-229ENST00000533572 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 ZMAT4Q9H898 229 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 RFNGQ9Y644 331 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
CTSB-229ENST00000533572 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
CTSB-229ENST00000533572 CTXND1A0A1B0GTU2 59 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 ID1P41134 155 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 MORN5Q5VZ52 161 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 FAM110AQ9BQ89 295 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 OR51M1Q9H341 326 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 DNAH9Q9NYC9 4486 aa12.87□□□□□ -0.35
CTSB-229ENST00000533572 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 A8MZ25 164 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms