RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 LINC00477Q96M19 166 aa6.05□□□□□ -1.44
SOX6-208ENST00000527619 LINC00479Q96M42 142 aa6.05□□□□□ -1.44
SOX6-208ENST00000527619 LINC01587Q99440 93 aa6.05□□□□□ -1.44
SOX6-208ENST00000527619 USF3Q68DE3 2245 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 SLC25A5P05141 298 aaKnown RBP6.04□□□□□ -1.44
SOX6-208ENST00000527619 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 Q8IYB0 196 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 KIR2DL4Q99706 377 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 TEX50A0A1B0GTY4 177 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 PEX7O00628 323 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 NCR2O95944 276 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 IGHV3-7P01780 117 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 ERVK-16P61578 105 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 PLXDC1Q8IUK5 500 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 C7orf69Q9H7B7 122 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 TCF19Q9Y242 345 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 AMMECR1Q9Y4X0 333 aaPredicted RBP6.04□□□□□ -1.44
SOX6-208ENST00000527619 TIMM8BQ9Y5J9 83 aaPredicted RBP6.04□□□□□ -1.44
SOX6-208ENST00000527619 F5P12259 2224 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 UNC13CQ8NB66 2214 aa6.04□□□□□ -1.44
SOX6-208ENST00000527619 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 FCGR3BO75015 233 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
SOX6-208ENST00000527619 ZNF138P52744 262 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 TNFAIP6P98066 277 aaPredicted RBP6.03□□□□□ -1.44
SOX6-208ENST00000527619 CFHR1Q03591 330 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 DEFB133Q30KQ1 61 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 OR4C13Q8NGP0 309 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 RASL10AQ92737 203 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 IGHV1OR21-1A0A087WYE8 117 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 CHEK1O14757 476 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 CRYGDP07320 174 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 IGLC6P0CF74 106 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 MYOD1P15172 320 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 NBL1P41271 181 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 UBE2L3P68036 154 aaKnown RBP6.03□□□□□ -1.44
SOX6-208ENST00000527619 FHL3Q13643 280 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 OR1C1Q15619 314 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 C3orf56Q8N813 242 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 COQ2Q96H96 371 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 CCDC140Q96MF4 163 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 RPP21Q9H633 154 aaKnown RBP6.03□□□□□ -1.44
SOX6-208ENST00000527619 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 TET2Q6N021 2002 aaPredicted RBP6.03□□□□□ -1.44
SOX6-208ENST00000527619 ESPL1Q14674 2120 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 GON4LQ3T8J9 2241 aa6.03□□□□□ -1.44
SOX6-208ENST00000527619 TRAV3A0A0B4J244 114 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 TRAV5A0A0B4J249 113 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 A8MWL6 223 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 CCL3P10147 92 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 PLGLB1Q02325 96 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 FOXF2Q12947 444 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 Q6Q795 121 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 HRCT1Q6UXD1 115 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 ZNF329Q86UD4 541 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 VKORC1L1Q8N0U8 176 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 PGLYRP4Q96LB8 373 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.44
SOX6-208ENST00000527619 PRRG4Q9BZD6 226 aa6.02□□□□□ -1.44
SOX6-208ENST00000527619 HCFC1P51610 2035 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 MUC3AQ02505 3323 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 PTPRBP23467 1997 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 TMEM262E9PQX1 116 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 MGST3O14880 152 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 CXCL13O43927 109 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 CSN1S1P47710 185 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 ZNF137PP52743 207 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 MRPS21P82921 87 aaKnown RBP6.02□□□□□ -1.45
SOX6-208ENST00000527619 C6orf226Q5I0X4 101 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 RTL8AQ9BWD3 113 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 SLC25A2Q9BXI2 301 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 PROK2Q9HC23 129 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 OCIAD1Q9NX40 245 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 PRNDQ9UKY0 176 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 KNL1Q8NG31 2342 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 IGHV3-43A0A0B4J1X8 118 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 C15orf61A6NNL5 157 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 SNCGO76070 127 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 IGHV3-9P01782 118 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 IGHV3-43DP0DP04 118 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 MEOX1P50221 254 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 LGALS9BQ3B8N2 356 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 LGALS9CQ6DKI2 356 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 PPP1R32Q7Z5V6 425 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 GTSF1Q8WW33 167 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 RPEQ96AT9 228 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 RASL11BQ9BPW5 248 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 GFRA4Q9GZZ7 299 aa6.02□□□□□ -1.45
SOX6-208ENST00000527619 CEP192Q8TEP8 1941 aa6.01□□□□□ -1.45
SOX6-208ENST00000527619 PSPNO60542 156 aa6.01□□□□□ -1.45
SOX6-208ENST00000527619 ATP5LO75964 103 aa6.01□□□□□ -1.45
SOX6-208ENST00000527619 APOHP02749 345 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms