RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 B4DEV8 164 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 TGOLN2O43493 480 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 OR2C1O95371 312 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 IL4P05112 153 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
VAPB-206ENST00000520497 CLEC3BP05452 202 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 UBE2G2P60604 165 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 CLEC19AQ6UXS0 136 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 OR4F17Q8NGA8 305 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 TMEM37Q8WXS4 190 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 SMIM7Q9BQ49 75 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 GNB4Q9HAV0 340 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 RABAC1Q9UI14 185 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 PUS1Q9Y606 427 aaKnown RBP eCLIP6.58□□□□□ -1.36
VAPB-206ENST00000520497 WI2-2373I1.2A0A1W2PRP0 233 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 C9JQL5 133 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 IGHV3-11P01762 117 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 ADCYAP1P18509 176 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 PROK1P58294 105 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 GUCA2BQ16661 112 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 ZNF674Q2M3X9 581 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 TCTEX1D4Q5JR98 221 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 PATE2Q6UY27 113 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 BPIFA4PQ86YQ2 179 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 SHANK2-AS3Q9BTD1 123 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
VAPB-206ENST00000520497 TMEM14CQ9P0S9 112 aa6.57□□□□□ -1.36
VAPB-206ENST00000520497 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 FAM74A7A6NL05 159 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 PPP5D1E7EU14 171 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 H3BQ15 152 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 H3BRN7 92 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
VAPB-206ENST00000520497 LGALS1P09382 135 aaKnown RBP6.56□□□□□ -1.36
VAPB-206ENST00000520497 OR10J4P0C629 311 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 RPL7P18124 248 aaKnown RBP6.56□□□□□ -1.36
VAPB-206ENST00000520497 ARL3P36405 182 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 CD81P60033 236 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 TMEM241Q24JQ0 296 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 OR4X2Q8NGF9 303 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 WFDC12Q8WWY7 111 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 GPR82Q96P67 336 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
VAPB-206ENST00000520497 MRPL27Q9P0M9 148 aaKnown RBP6.56□□□□□ -1.36
VAPB-206ENST00000520497 CLPSL1A2RUU4 121 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 S100A9P06702 114 aaKnown RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 HIST1H1EP10412 219 aaKnown RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 BMI1P35226 326 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 CDX1P47902 265 aaPredicted RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 ATP5G3P48201 142 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 MEOX2P50222 304 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 USF2Q15853 346 aaPredicted RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 AWAT1Q58HT5 328 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 MORN5Q5VZ52 161 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 TOMM20LQ6UXN7 152 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 C4orf3Q8WVX3 66 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 TMEM158Q8WZ71 300 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 C11orf52Q96A22 123 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 GRAMD2BQ96HH9 432 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 FAM167A-AS1Q96KT0 104 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 METTL26Q96S19 204 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 PARLQ9H300 379 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 RPS10P5Q9NQ39 176 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 PEF1Q9UBV8 284 aaKnown RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 RNF114Q9Y508 228 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 YTHDF2Q9Y5A9 579 aaKnown RBP6.55□□□□□ -1.36
VAPB-206ENST00000520497 SORL1Q92673 2214 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 STAB1Q9NY15 2570 aa6.55□□□□□ -1.36
VAPB-206ENST00000520497 A0A087WWC5 75 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 IGHV3-35A0A0C4DH35 117 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 K7EQM0 130 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 NDUFA4O00483 81 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 GGCTO75223 188 aaKnown RBP6.54□□□□□ -1.36
VAPB-206ENST00000520497 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 NBEAP1P0C6P0 100 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 AKR1C3P42330 323 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 CNN1P51911 297 aaKnown RBP6.54□□□□□ -1.36
VAPB-206ENST00000520497 PSG9Q00887 426 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 BTN1A1Q13410 526 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 ADIRFQ15847 76 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 OR8I2Q8N0Y5 310 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 LYPD1Q8N2G4 141 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 CMTM2Q8TAZ6 248 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 FXYD5Q96DB9 178 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 AAMDCQ9H7C9 122 aa6.54□□□□□ -1.36
VAPB-206ENST00000520497 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 A0A1W2PS18 150 aa6.53□□□□□ -1.36
VAPB-206ENST00000520497 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms