RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SGK494Q96LW2 274 aa20.68■□□□□ 0.9
COL13A1-210ENST00000517713 CLEC3BP05452 202 aa20.67■□□□□ 0.9
COL13A1-210ENST00000517713 RPL15P61313 204 aaKnown RBP20.67■□□□□ 0.9
COL13A1-210ENST00000517713 CMTM2Q8TAZ6 248 aa20.67■□□□□ 0.9
COL13A1-210ENST00000517713 CDX1P47902 265 aaPredicted RBP20.66■□□□□ 0.9
COL13A1-210ENST00000517713 C19orf54Q5BKX5 351 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 TMEM190Q8WZ59 177 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 EEF1AKMT3Q96AZ1 226 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 SMIM12Q96EX1 92 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 GAR1Q9NY12 217 aaKnown RBP20.66■□□□□ 0.9
COL13A1-210ENST00000517713 S100A8P05109 93 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 LYPD1Q8N2G4 141 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 ZNF414Q96IQ9 312 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 GPR82Q96P67 336 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 SERTAD4Q9NUC0 356 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 RABAC1Q9UI14 185 aa20.66■□□□□ 0.9
COL13A1-210ENST00000517713 FAM231DQ6ZW35 169 aa20.65■□□□□ 0.9
COL13A1-210ENST00000517713 TRAPPC1Q9Y5R8 145 aa20.65■□□□□ 0.9
COL13A1-210ENST00000517713 ZNF705GA8MUZ8 300 aaPredicted RBP20.65■□□□□ 0.9
COL13A1-210ENST00000517713 OR8I2Q8N0Y5 310 aa20.65■□□□□ 0.9
COL13A1-210ENST00000517713 CCDC140Q96MF4 163 aa20.65■□□□□ 0.9
COL13A1-210ENST00000517713 LINC00527Q9UJ94 153 aa20.65■□□□□ 0.9
COL13A1-210ENST00000517713 TRBV7-1A0A0A6YYK4 115 aa20.64■□□□□ 0.89
COL13A1-210ENST00000517713 SIGLEC15Q6ZMC9 328 aa20.64■□□□□ 0.89
COL13A1-210ENST00000517713 BEX4Q9NWD9 120 aaPredicted RBP20.64■□□□□ 0.89
COL13A1-210ENST00000517713 BMPR1BO00238 502 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 LTAP01374 205 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 CLEC19AQ6UXS0 136 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 PITPNC1Q9UKF7 332 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 FBN2P35556 2912 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 IGHV3-35A0A0C4DH35 117 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 J3QLI3 93 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 M0QZK8 103 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 LOXL1Q08397 574 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-210ENST00000517713 MAPK1IP1LQ8NDC0 245 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 MLST8Q9BVC4 326 aa20.63■□□□□ 0.89
COL13A1-210ENST00000517713 IGF1P05019 195 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 S100A7P31151 101 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 ATP5G2Q06055 141 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 PRR27Q6MZM9 219 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 TOMM20LQ6UXN7 152 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 GNB4Q9HAV0 340 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 CELSR2Q9HCU4 2923 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 EPG5Q9HCE0 2579 aa20.62■□□□□ 0.89
COL13A1-210ENST00000517713 TGFAP01135 160 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 PDE6HQ13956 83 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 DEFB113Q30KQ7 82 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 GFI1BQ5VTD9 330 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 NUDT10Q8NFP7 164 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 NUDT11Q96G61 164 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 FAM208BQ5VWN6 2430 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 SMIM27A0A1W2PRY6 76 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 RNF223E7ERA6 249 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 GATCO43716 136 aaKnown RBP20.61■□□□□ 0.89
COL13A1-210ENST00000517713 IGHG2P01859 326 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 RPL7P18124 248 aaKnown RBP20.61■□□□□ 0.89
COL13A1-210ENST00000517713 MEOX2P50222 304 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 GOLT1AQ6ZVE7 132 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 C12orf57Q99622 126 aa20.61■□□□□ 0.89
COL13A1-210ENST00000517713 IFITM10A6NMD0 228 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 ZFAND3Q9H8U3 227 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 IGHV3OR16-8A0A075B7F1 116 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 FAM223BA6NKX1 122 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 FAM223AQ8IWN6 122 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 HIST3H2BBQ8N257 126 aa20.6■□□□□ 0.89
COL13A1-210ENST00000517713 TCL1AP56279 114 aa20.59■□□□□ 0.89
COL13A1-210ENST00000517713 CA1P00915 261 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-210ENST00000517713 RPL19P84098 196 aaKnown RBP20.58■□□□□ 0.89
COL13A1-210ENST00000517713 Q86TA4 180 aa20.58■□□□□ 0.89
COL13A1-210ENST00000517713 LRRC75A-AS1Q8N1F1 130 aa20.58■□□□□ 0.89
COL13A1-210ENST00000517713 MBD6Q96DN6 1003 aa20.58■□□□□ 0.89
COL13A1-210ENST00000517713 GRAMD2BQ96HH9 432 aa20.58■□□□□ 0.89
COL13A1-210ENST00000517713 TRAV8-1A0A0A6YYK1 113 aa20.58■□□□□ 0.88
COL13A1-210ENST00000517713 IGLV2-11P01706 119 aa20.58■□□□□ 0.88
COL13A1-210ENST00000517713 TRGV3P03979 118 aa20.58■□□□□ 0.88
COL13A1-210ENST00000517713 CELSR1Q9NYQ6 3014 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 LRRK2Q5S007 2527 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 XKRY2A2RUG3 117 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 BLCAPP62952 87 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 ATP6V0BQ99437 205 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 GPR61Q9BZJ8 451 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 AAMDCQ9H7C9 122 aa20.57■□□□□ 0.88
COL13A1-210ENST00000517713 TRBV6-1A0A0K0K1D8 114 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 CBLN1P23435 193 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 PSG9Q00887 426 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 PDZD11Q5EBL8 140 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 K7EQM0 130 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 IER3P46695 156 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 PRNTQ86SH4 94 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 TMEM183AQ8IXX5 376 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 TMEM75Q8N9X5 138 aa20.56■□□□□ 0.88
COL13A1-210ENST00000517713 NOL4LQ96MY1 436 aaPredicted RBP20.56■□□□□ 0.88
COL13A1-210ENST00000517713 SPINK4O60575 86 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 SMIM6P0DI80 62 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 RELQ04864 619 aaPredicted RBP20.55■□□□□ 0.88
COL13A1-210ENST00000517713 ZFHX3Q15911 3703 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 DEFB112Q30KQ8 113 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 Q5PR19 223 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 SMAD5-AS1Q9Y6J3 95 aa20.55■□□□□ 0.88
COL13A1-210ENST00000517713 ANKRD17O75179 2603 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms