RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 HIST2H3PS2Q5TEC6 136 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 SPOPLQ6IQ16 392 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 TMEM14EPQ6UXP3 125 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 MALSU1Q96EH3 234 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 TMEM126AQ9H061 195 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 TMEM133Q9H2Q1 129 aa-1.47□□□□□ -2.64
SNORA40.14-201ENST00000516543 CTTNBP2Q8WZ74 1663 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 DOPEY2Q9Y3R5 2298 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 TRAV26-2A0A0B4J265 109 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 PIRO00625 290 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 PDE6GP18545 87 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 C10orf111Q8N326 155 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 OR51A2Q8NGJ7 313 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 STAG3L4Q8TBR4 150 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 POP5Q969H6 163 aaKnown RBP-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 C19orf60Q96EN9 201 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 LINC00208Q96KT6 92 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 SLC25A21Q9BQT8 299 aaPredicted RBP-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 PTPRQQ9UMZ3 2332 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 RTL1A6NKG5 1358 aa-1.48□□□□□ -2.65
SNORA40.14-201ENST00000516543 A0A1W2PRS3 328 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 OR4C46A6NHA9 309 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 M0QZ92 97 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 NDUFB3O43676 98 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 OR7C1O76099 320 aaPredicted RBP-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 RBP1P09455 135 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 EIF5AP63241 154 aaKnown RBP-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 KRT222Q8N1A0 295 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 C12orf45Q8N5I9 185 aaPredicted RBP-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 ALMS1Q8TCU4 4167 aa-1.49□□□□□ -2.65
SNORA40.14-201ENST00000516543 ABCA1O95477 2261 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 PDZD2O15018 2839 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 C9orf170A2RU37 121 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 H0Y980 276 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 YKT6O15498 198 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 TPM1P09493 284 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 OCMP0CE72 109 aaPredicted RBP-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 DEFA3P59666 94 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 PSME3P61289 254 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 XAF1Q6GPH4 301 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 ARPINQ7Z6K5 226 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 FAM172AQ8WUF8 416 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 MRPL27Q9P0M9 148 aaKnown RBP-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 LSM5Q9Y4Y9 91 aaKnown RBP-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 NUP98P52948 1817 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 ATG2AQ2TAZ0 1938 aa-1.5□□□□□ -2.65
SNORA40.14-201ENST00000516543 ESPL1Q14674 2120 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 FAM236DA0A1B0GTK5 79 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 HAND1O96004 215 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 SMIM17P0DL12 118 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 FAM236CP0DP71 79 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 HADHBP55084 474 aaKnown RBP-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 COX6A2Q02221 97 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 C2orf50Q96LR7 162 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 PARD6GQ9BYG4 376 aaPredicted RBP-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 CCDC90BQ9GZT6 254 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 APC2O95996 2303 aa-1.51□□□□□ -2.65
SNORA40.14-201ENST00000516543 C17orf112F2Z3M2 114 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 APOEP02649 317 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 PRM1P04553 51 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 SRP14P37108 136 aaKnown RBP-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 ETV6P41212 452 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 CLEC6AQ6EIG7 209 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 LINC00299Q6ZSB3 139 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 OR52E6Q96RD3 313 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 FGFR1OP2Q9NVK5 253 aa-1.52□□□□□ -2.65
SNORA40.14-201ENST00000516543 LRP1BQ9NZR2 4599 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 TRAV27A0A087WT01 109 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 TRGV10A0A0A0MS01 117 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 A0A0J9YY99 117 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 A6NN06 94 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 SULT1C4O75897 302 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 IGHV3-33P01772 117 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 COL6A3P12111 3177 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 SPCS3P61009 180 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 AKAP6Q13023 2319 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 NCOA1Q15788 1441 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 C22orf39Q6P5X5 142 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 CD200R1LQ6Q8B3 271 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 SLC25A40Q8TBP6 338 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 DRC3Q9H069 523 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 HERC1Q15751 4861 aa-1.53□□□□□ -2.65
SNORA40.14-201ENST00000516543 MED13LQ71F56 2210 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 DOCK4Q8N1I0 1966 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 TRPM7Q96QT4 1865 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 EVI2AP22794 236 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 AP3S2P59780 193 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 KRR1Q13601 381 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 ACOT6Q3I5F7 207 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 S100A7AQ86SG5 101 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 ARL5AQ9Y689 179 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 CSMD3Q7Z407 3707 aa-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 AFDNP55196 1824 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.14-201ENST00000516543 UNC13BO14795 1591 aa-1.55□□□□□ -2.66
SNORA40.14-201ENST00000516543 hCG_1818297A0A087WSY0 165 aa-1.55□□□□□ -2.66
SNORA40.14-201ENST00000516543 A0A096LPI6 279 aa-1.55□□□□□ -2.66
SNORA40.14-201ENST00000516543 A8MT66 165 aa-1.55□□□□□ -2.66
SNORA40.14-201ENST00000516543 CALUO43852 315 aaPredicted RBP-1.55□□□□□ -2.66
SNORA40.14-201ENST00000516543 VBP1P61758 197 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms