RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TSSC4Q9Y5U2 329 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 K7EMT4 169 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PFN1P07737 140 aaKnown RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 CXCL3P19876 107 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 ZNF525Q8N782 197 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PHLDA1Q8WV24 401 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 TRBV20OR9-2A0A075B6H5 130 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 IGHV1-18A0A0C4DH31 117 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 IGHV2-70DA0A0C4DH43 119 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 A0A0U1RQS6 177 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 CENPVL1A0A0U1RR11 272 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 ZNF56Q15929 161 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PLAC9Q5JTB6 97 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 THAP8Q8NA92 274 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 RASL10AQ92737 203 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 MTORP42345 2549 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 TFF2Q03403 129 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 Q6ZWC4 215 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 BIVMQ86UB2 503 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 FGFBP3Q8TAT2 258 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 WIPF2Q8TF74 440 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 IGF2RP11717 2491 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 IGHV1-3A0A0C4DH29 117 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PRSS47A8MTI9 375 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 LYPD3O95274 346 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 IER3P46695 156 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 HERV-K104P63124 156 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 SRSF6Q13247 344 aaKnown RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 SMIM9A6NGZ8 99 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 FAM24BQ8N5W8 94 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PRDM6Q9NQX0 595 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 C9JQL5 133 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 F8WDY8 70 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 PAX2Q02962 417 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 SS18Q15532 418 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 ZAR1Q86SH2 424 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 RTBDNQ9BSG5 229 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-209ENST00000511467 KLHDC2Q9Y2U9 406 aa4.05□□□□□ -1.76
PTPN13-209ENST00000511467 TRAV26-1A0A087WT03 109 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 HIGD1CA8MV81 97 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 H0YJW9 148 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 KRTAP27-1Q3LI81 207 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 LINC00469Q8N7U9 141 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ZMAT4Q9H898 229 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 TRAV24A0A0B4J272 114 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 OR2J3O76001 311 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 REG1BP48304 166 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ARF6P62330 175 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ADORA2A-AS1P86434 159 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 FAM219BQ5XKK7 198 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ANKRD34AQ69YU3 496 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 RNF167Q9H6Y7 350 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 PNRC2Q9NPJ4 139 aaKnown RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 FOXJ2Q9P0K8 574 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 IGHV1-46P01743 117 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 DAZ2Q13117 558 aaKnown RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 DAZ4Q86SG3 579 aaKnown RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 C9orf106Q8NAJ2 232 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 DAZ3Q9NR90 486 aaKnown RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 A0A087WV48 116 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 MSGN1A6NI15 193 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ACYP1P07311 99 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 QRFPP83859 136 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 PSG3Q16557 428 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 IFITM1P13164 125 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 HOXD3P31249 432 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 B3GALT5-AS1P59052 145 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 SUMO2P61956 95 aaKnown RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 PMVKQ15126 192 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 ZFP2Q6ZN57 461 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 AKIRIN1Q9H9L7 192 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 DEFB108AA8MXU0 73 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 K7EM74 188 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 M0R2P5 195 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 GATA2P23769 480 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-209ENST00000511467 Q0VG73 95 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 GOLT1AQ6ZVE7 132 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 TMEM105Q8N8V8 129 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 NPBQ8NG41 125 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 KLF12Q9Y4X4 402 aa4.04□□□□□ -1.76
PTPN13-209ENST00000511467 M0R381 172 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 ZNF324O75467 553 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 MGPP08493 103 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 Q6P435 159 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 VWCEQ96DN2 955 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 ZNF319Q9P2F9 582 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 SPRR3Q9UBC9 169 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 K7EP13 123 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 LEPROTO15243 131 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 ZNF25P17030 456 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-209ENST00000511467 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 FOXI2Q6ZQN5 318 aa4.03□□□□□ -1.76
PTPN13-209ENST00000511467 KIR2DL5BQ8NHK3 375 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms