RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CEP19Q96LK0 163 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 ARMC1Q9NVT9 282 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 CHCHD2Q9Y6H1 151 aaPredicted RBP0.57□□□□□ -2.32
PSPC1-205ENST00000497722 COX7CP15954 63 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 DSCR4P56555 118 aaPredicted RBP0.56□□□□□ -2.32
PSPC1-205ENST00000497722 TMED2Q15363 201 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 DHRS4L2Q6PKH6 230 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 PXT1Q8NFP0 134 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 OR10AC1Q8NH08 325 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 RAB37Q96AX2 223 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 DGCR14Q96DF8 476 aaKnown RBP0.56□□□□□ -2.32
PSPC1-205ENST00000497722 TMEM126AQ9H061 195 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 WFDC10AQ9H1F0 79 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 OR52A1Q9UKL2 312 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 ARL5AQ9Y689 179 aa0.56□□□□□ -2.32
PSPC1-205ENST00000497722 NUP98P52948 1817 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 NUP210LQ5VU65 1888 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 TRAV23DV6A0A075B6W5 121 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 NDUFC2O95298 119 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 CXCL8P10145 99 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 HLA-EP13747 358 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 KDELR1P24390 212 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 NFYBP25208 207 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 LINC00575Q6W349 94 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 ZNF833PQ6ZTB9 187 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 OR5D16Q8NGK9 328 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 GGACTQ9BVM4 153 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 SCN8AQ9UQD0 1980 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 ADGBQ8N7X0 1667 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 MIA2Q96PC5 1412 aa0.55□□□□□ -2.32
PSPC1-205ENST00000497722 NCAPD3P42695 1498 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 ARHGEF11O15085 1522 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 CASP8AP2Q9UKL3 1982 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 E7EUB6 86 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 G3V2T6 193 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 TMEM256-PLSCR3K7ERE1 68 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 AIPO00170 330 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 ATP5HO75947 161 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 RAB5CP51148 216 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 DYNLT3P51808 116 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 S100A7AQ86SG5 101 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 PPTC7Q8NI37 304 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 CHCHD1Q96BP2 118 aaKnown RBP0.54□□□□□ -2.32
PSPC1-205ENST00000497722 TCEAL2Q9H3H9 227 aaPredicted RBP0.54□□□□□ -2.32
PSPC1-205ENST00000497722 MED12Q93074 2177 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 MYLKQ15746 1914 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 NISCHQ9Y2I1 1504 aa0.54□□□□□ -2.32
PSPC1-205ENST00000497722 PIK3C2AO00443 1686 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 A0A096LPI6 279 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 M0R378 163 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 PPYP01298 95 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 ROMO1P60602 79 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 NCALDP61601 193 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 VBP1P61758 197 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 SPATA45Q537H7 98 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 CROCCP2Q86T23 111 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 POP5Q969H6 163 aaKnown RBP0.53□□□□□ -2.32
PSPC1-205ENST00000497722 TEX37Q96LM6 180 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 PYCARDQ9ULZ3 195 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 KIAA1549Q9HCM3 1950 aa0.53□□□□□ -2.32
PSPC1-205ENST00000497722 ZCCHC11Q5TAX3 1644 aaKnown RBP0.53□□□□□ -2.33
PSPC1-205ENST00000497722 MYH2Q9UKX2 1941 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 DUXBA0A1W2PPF3 345 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 APOA2P02652 100 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 IFNA4P05014 189 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 SCGB2B2Q4G0G5 96 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 SPINK9Q5DT21 86 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 C1orf134Q5TEV5 83 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 KRTAP26-1Q6PEX3 210 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 LRRC18Q8N456 261 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 ZHX1-C8orf76Q96EF9 292 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 PBDC1Q9BVG4 233 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 MAP1LC3BQ9GZQ8 125 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 POPDC3Q9HBV1 291 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 PRNDQ9UKY0 176 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 RNF11Q9Y3C5 154 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 ALPK3Q96L96 1907 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 DOCK4Q8N1I0 1966 aa0.52□□□□□ -2.33
PSPC1-205ENST00000497722 HEATR1Q9H583 2144 aaKnown RBP0.52□□□□□ -2.33
PSPC1-205ENST00000497722 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 JMJD7-PLA2G4BH0Y9G9 81 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 ATG12O94817 140 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 IFNA14P01570 189 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 TMBIM6P55061 237 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
PSPC1-205ENST00000497722 FRMPD1Q5SYB0 1578 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 UHRF1BP1Q6BDS2 1440 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 CD109Q6YHK3 1445 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 KRTAP19-3Q7Z4W3 81 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 CNTRLQ7Z7A1 2325 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 LYG2Q86SG7 212 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 OR5AS1Q8N127 324 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 EXOC3-AS1Q8N2X6 119 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 OR10AG1Q8NH19 301 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 Q8TAT8 98 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 OR2J1Q9GZK6 312 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 SH3BGRL3Q9H299 93 aa0.51□□□□□ -2.33
PSPC1-205ENST00000497722 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
PSPC1-205ENST00000497722 CAMSAP2Q08AD1 1489 aa0.5□□□□□ -2.33
PSPC1-205ENST00000497722 CEP164Q9UPV0 1460 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms