RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 AMY1AP04745 511 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
CHTOP-206ENST00000495554 LYZP61626 148 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.53
CHTOP-206ENST00000495554 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 KLRD1Q13241 179 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 TM4SF20Q53R12 229 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 BAGE3Q86Y29 109 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 FAM168AQ92567 244 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 GPR82Q96P67 336 aa11.71□□□□□ -0.53
CHTOP-206ENST00000495554 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 K7EIM0 57 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 SERF1AO75920 110 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 IGKV1-17P01599 117 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 HIST1H1EP10412 219 aaKnown RBP11.71□□□□□ -0.54
CHTOP-206ENST00000495554 TPPP2P59282 170 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.54
CHTOP-206ENST00000495554 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.54
CHTOP-206ENST00000495554 LINC00310P59036 64 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 MRPL54Q6P161 138 aaKnown RBP11.7□□□□□ -0.54
CHTOP-206ENST00000495554 RASL11AQ6T310 242 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 Q9H3A6 140 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 HERV-K104P63124 156 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 HES1Q14469 280 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 IGFBPL1Q8WX77 278 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
CHTOP-206ENST00000495554 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
CHTOP-206ENST00000495554 TNFRSF18Q9Y5U5 241 aa11.7□□□□□ -0.54
CHTOP-206ENST00000495554 AKAP6Q13023 2319 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 ABCA1O95477 2261 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 CCDC144NLQ6NUI1 221 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 KIR3DL3Q8N743 410 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 SCGB1D1O95968 90 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 TOMM40O96008 361 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 TCRAP04437 139 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 CD24P25063 80 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
CHTOP-206ENST00000495554 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 WIPF2Q8TF74 440 aaPredicted RBP11.69□□□□□ -0.54
CHTOP-206ENST00000495554 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
CHTOP-206ENST00000495554 A0A1B0GW15 77 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
CHTOP-206ENST00000495554 UBTD1Q9HAC8 227 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 LTAP01374 205 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
CHTOP-206ENST00000495554 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 H3BTX0 84 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 PSG3Q16557 428 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 NUP35Q8NFH5 326 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 TMEM190Q8WZ59 177 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 SPTAN1Q13813 2472 aaKnown RBP11.67□□□□□ -0.54
CHTOP-206ENST00000495554 WNK2Q9Y3S1 2297 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 BMPR1BO00238 502 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 APCSP02743 223 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 MINOS1Q5TGZ0 78 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 ZNF586Q9NXT0 402 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 MINOS1-NBL1R4GNA1 71 aa11.67□□□□□ -0.54
CHTOP-206ENST00000495554 SVEP1Q4LDE5 3571 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 NPIPB5A8MRT5 1133 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 F2Z2F3 143 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 BPIFA4PQ86YQ2 179 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 CST9LQ9H4G1 147 aa11.66□□□□□ -0.54
CHTOP-206ENST00000495554 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 SRIP30626 198 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 TFPI2P48307 235 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 RIPPLY3P57055 190 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 Q6ZWC4 215 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 ZNF491Q8N8L2 437 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 ARPC1AQ92747 370 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 CSMD1Q96PZ7 3565 aa11.65□□□□□ -0.54
CHTOP-206ENST00000495554 NCBP2LA6PVI3 153 aaKnown RBP11.65□□□□□ -0.55
CHTOP-206ENST00000495554 H3BRN7 92 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF253O75346 499 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 EFNA4P52798 201 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 EBI3Q14213 229 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms