RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 TFPI2P48307 235 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 PRNTQ86SH4 94 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
SEMA4D-220ENST00000492386 SPTBN2O15020 2390 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 SIAH2O43255 324 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 COL8A1P27658 744 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
SEMA4D-220ENST00000492386 TRBV19A0A075B6N1 114 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 CNIH1O95406 144 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 FAM162BQ5T6X4 162 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 TLN1Q9Y490 2541 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 LOC102724200A0A096LPH7 203 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 H3BRN7 92 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 NPSP0C0P6 89 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 FOSL1P15407 271 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 ZNF672Q499Z4 452 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 STPG4Q8N801 248 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 SCNM1Q9BWG6 230 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 LAMTOR2Q9Y2Q5 125 aa12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-220ENST00000492386 NBL1P41271 181 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 GOLT1BQ9Y3E0 138 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 HAX1O00165 279 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 LIPFP07098 398 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 GRNP28799 593 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 TSPOP30536 169 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 SIGLEC15Q6ZMC9 328 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 BPIFA4PQ86YQ2 179 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 ZC2HC1AQ96GY0 325 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 NDFIP1Q9BT67 221 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 DCHS2Q6V1P9 2916 aa12.73□□□□□ -0.37
SEMA4D-220ENST00000492386 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 IGLL1P15814 213 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 ZNF491Q8N8L2 437 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 CFHR4Q92496 578 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 CHEK1O14757 476 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 MRPS12O15235 138 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 NBR2O15453 112 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 ARHGAP32A7KAX9 2087 aa12.72□□□□□ -0.37
SEMA4D-220ENST00000492386 HTR1DP28221 377 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 LINC00173Q6ZV60 143 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 OR4F17Q8NGA8 305 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 OR11H6Q8NGC7 330 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 TMEM190Q8WZ59 177 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 LRBAP50851 2863 aa12.71□□□□□ -0.37
SEMA4D-220ENST00000492386 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 MUC6Q6W4X9 2439 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 K7ENP7 123 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 HLA-DRB1P01911 266 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 LINC00614P0C842 121 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 FBLN7Q53RD9 439 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 RNF125Q96EQ8 232 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 ASCL2Q99929 193 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 DPM3Q9P2X0 92 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 RNF24Q9Y225 148 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.38
SEMA4D-220ENST00000492386 LY6HO94772 140 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 NDUFB8O95169 186 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 IL4P05112 153 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 LYPD1Q8N2G4 141 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 NPBQ8NG41 125 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 CEP295Q9C0D2 2601 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 NDUFA3O95167 84 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 ARF6P62330 175 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 ZNF414Q96IQ9 312 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 PSG8Q9UQ74 426 aa12.7□□□□□ -0.38
SEMA4D-220ENST00000492386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 PSG3Q16557 428 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 BCL6BQ8N143 479 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 S4R3C0 116 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 A0A1B0GUT8 65 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 LEPROTL1O95214 131 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 CRIP1P50238 77 aa12.69□□□□□ -0.38
SEMA4D-220ENST00000492386 ABCA4P78363 2273 aa12.68□□□□□ -0.38
SEMA4D-220ENST00000492386 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
SEMA4D-220ENST00000492386 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
SEMA4D-220ENST00000492386 ZNF138P52744 262 aa12.68□□□□□ -0.38
SEMA4D-220ENST00000492386 KLRD1Q13241 179 aa12.68□□□□□ -0.38
SEMA4D-220ENST00000492386 CYB5R2Q6BCY4 276 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms