RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 C20orf144Q9BQM9 153 aa16.31■□□□□ 0.2
TMED4-204ENST00000477639 SHANK2-AS3Q9BTD1 123 aa16.31■□□□□ 0.2
TMED4-204ENST00000477639 HIVEP3Q5T1R4 2406 aa16.3■□□□□ 0.2
TMED4-204ENST00000477639 HOXB4P17483 251 aaPredicted RBP16.3■□□□□ 0.2
TMED4-204ENST00000477639 CD24P25063 80 aa16.3■□□□□ 0.2
TMED4-204ENST00000477639 KLF5Q13887 457 aaPredicted RBP16.3■□□□□ 0.2
TMED4-204ENST00000477639 TCF24Q7RTU0 167 aa16.3■□□□□ 0.2
TMED4-204ENST00000477639 RBM14Q96PK6 669 aaKnown RBP16.3■□□□□ 0.2
TMED4-204ENST00000477639 H3BRN7 92 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 Q86TA4 180 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 NIT1Q86X76 327 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 EREGO14944 169 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 IGLV2-11P01706 119 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 PMCHP20382 165 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 KRTDAPP60985 99 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 C5orf64Q2M2E5 130 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 EXOC3-AS1Q8N2X6 119 aa16.29■□□□□ 0.2
TMED4-204ENST00000477639 ALKBH7Q9BT30 221 aaPredicted RBP16.29■□□□□ 0.2
TMED4-204ENST00000477639 TRBV6-1A0A0K0K1D8 114 aa16.28■□□□□ 0.2
TMED4-204ENST00000477639 A8MWL6 223 aa16.28■□□□□ 0.2
TMED4-204ENST00000477639 P01737 135 aa16.28■□□□□ 0.2
TMED4-204ENST00000477639 ZNF491Q8N8L2 437 aa16.28■□□□□ 0.2
TMED4-204ENST00000477639 GTSF1Q8WW33 167 aa16.28■□□□□ 0.2
TMED4-204ENST00000477639 TRBV19A0A075B6N1 114 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 A0A1W2PRD5 423 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 A0A1W2PRF3 423 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 A0A1W2PRM7 423 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 NPIPB6E9PJ23 425 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 CAMPP49913 170 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 KLF17Q5JT82 389 aaPredicted RBP16.27■□□□□ 0.2
TMED4-204ENST00000477639 C1orf122Q6ZSJ8 110 aa16.27■□□□□ 0.2
TMED4-204ENST00000477639 SSBP4Q9BWG4 385 aaPredicted RBP16.27■□□□□ 0.2
TMED4-204ENST00000477639 WI2-2373I1.2A0A1W2PRP0 233 aa16.27■□□□□ 0.19
TMED4-204ENST00000477639 GPR6P46095 362 aaPredicted RBP16.27■□□□□ 0.19
TMED4-204ENST00000477639 TMEM190Q8WZ59 177 aa16.27■□□□□ 0.19
TMED4-204ENST00000477639 SNHG12Q9BXW3 62 aa16.27■□□□□ 0.19
TMED4-204ENST00000477639 TRAV8-1A0A0A6YYK1 113 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 DIRC3C9JPN6 131 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 RNF224P0DH78 156 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 IGLC2P0DOY2 106 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 GOLT1AQ6ZVE7 132 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 DTX2Q86UW9 622 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 BPIFA4PQ86YQ2 179 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 DYNAPQ8N1N2 210 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 C17orf77Q96MU5 243 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 FANCD2OSQ96PS1 177 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 GFRA4Q9GZZ7 299 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 USP9XQ93008 2570 aaPredicted RBP16.26■□□□□ 0.19
TMED4-204ENST00000477639 DOPEY2Q9Y3R5 2298 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 ARHGAP32A7KAX9 2087 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 IGLV11-55A0A075B6I3 123 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 NPIPB5A8MRT5 1133 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 MRPS12O15235 138 aaKnown RBP16.26■□□□□ 0.19
TMED4-204ENST00000477639 HBBP68871 147 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 HES1Q14469 280 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 C16orf54Q6UWD8 224 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 FAM19A2Q8N3H0 131 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 DAZAP1Q96EP5 407 aaKnown RBP16.26■□□□□ 0.19
TMED4-204ENST00000477639 RNF125Q96EQ8 232 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 VAMP8Q9BV40 100 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 RNF24Q9Y225 148 aa16.26■□□□□ 0.19
TMED4-204ENST00000477639 SOX21Q9Y651 276 aaPredicted RBP16.26■□□□□ 0.19
TMED4-204ENST00000477639 ABCA4P78363 2273 aa16.25■□□□□ 0.19
TMED4-204ENST00000477639 ZNF562Q6V9R5 426 aa16.25■□□□□ 0.19
TMED4-204ENST00000477639 CIARTQ8N365 385 aaPredicted RBP16.25■□□□□ 0.19
TMED4-204ENST00000477639 Q8N6K4 173 aa16.25■□□□□ 0.19
TMED4-204ENST00000477639 ZNF785A8K8V0 405 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 SIGLEC15Q6ZMC9 328 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 Q71RC1 249 aaPredicted RBP16.24■□□□□ 0.19
TMED4-204ENST00000477639 VMO1Q7Z5L0 202 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 PRNTQ86SH4 94 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 KIR3DL3Q8N743 410 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 OR4F17Q8NGA8 305 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 PGLYRP4Q96LB8 373 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 MIEN1Q9BRT3 115 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 PAM16Q9Y3D7 125 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 LRRK2Q5S007 2527 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 FAM231BA6NCW3 169 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 IL4P05112 153 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 C3orf79P0CE67 100 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 RAB4AP20338 218 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 RBPMS2Q6ZRY4 209 aaKnown RBP16.24■□□□□ 0.19
TMED4-204ENST00000477639 LYPD1Q8N2G4 141 aa16.24■□□□□ 0.19
TMED4-204ENST00000477639 ZNF48Q96MX3 618 aaPredicted RBP16.24■□□□□ 0.19
TMED4-204ENST00000477639 ABCA1O95477 2261 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 TRAV30A0A087WSZ9 112 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 M0R143 59 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 TOX4O94842 621 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 HLA-DRB1P01911 266 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 ZFP36P26651 326 aaKnown RBP16.23■□□□□ 0.19
TMED4-204ENST00000477639 CCDC144NLQ6NUI1 221 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 TTC9CQ8N5M4 171 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 OR4B1Q8NGF8 309 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 OR2D3Q8NGH3 330 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 S4R3C0 116 aa16.23■□□□□ 0.19
TMED4-204ENST00000477639 OOSP1A8MZH6 123 aa16.22■□□□□ 0.19
TMED4-204ENST00000477639 F8W735 103 aaPredicted RBP16.22■□□□□ 0.19
TMED4-204ENST00000477639 MFAP4P55083 255 aa16.22■□□□□ 0.19
TMED4-204ENST00000477639 NDPQ00604 133 aa16.22■□□□□ 0.19
TMED4-204ENST00000477639 EBI3Q14213 229 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms