RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 METTL26Q96S19 204 aa6.78□□□□□ -1.32
MCF2L-223ENST00000473345 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 K7EPK0 472 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 HLA-DRB4P13762 266 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 HTN3P15516 51 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 NKX2-1P43699 371 aaPredicted RBP6.77□□□□□ -1.33
MCF2L-223ENST00000473345 AKR1C2P52895 323 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 LGALSLQ3ZCW2 172 aaPredicted RBP6.77□□□□□ -1.33
MCF2L-223ENST00000473345 UBE2DNLQ8IWF7 75 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 NARS2Q96I59 477 aaKnown RBP6.77□□□□□ -1.33
MCF2L-223ENST00000473345 C17orf77Q96MU5 243 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 NEU1Q99519 415 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 SLC35B3Q9H1N7 401 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.77□□□□□ -1.33
MCF2L-223ENST00000473345 GSKIPQ9P0R6 139 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 HSPB7Q9UBY9 170 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 TNFSF18Q9UNG2 199 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 HLA-DRB4X5D2U9 266 aa6.77□□□□□ -1.33
MCF2L-223ENST00000473345 HERC1Q15751 4861 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 RNF222A6NCQ9 220 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 F6UB75 175 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 SOCS3O14543 225 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 SPART-AS1P0CW21 52 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 PET100P0DJ07 73 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 SNCAP37840 140 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 OPRK1P41145 380 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 NKX2-5P52952 324 aaPredicted RBP6.76□□□□□ -1.33
MCF2L-223ENST00000473345 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 ZNF546Q86UE3 836 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 C9orf62Q8N4C0 152 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 OR52E5Q8NH55 327 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 OR1S1Q8NH92 325 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 THAP6Q8TBB0 222 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
MCF2L-223ENST00000473345 OR5AC2Q9NZP5 309 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 CACNG5Q9UF02 275 aa6.76□□□□□ -1.33
MCF2L-223ENST00000473345 RCL1Q9Y2P8 373 aaKnown RBP6.76□□□□□ -1.33
MCF2L-223ENST00000473345 TRAV30A0A087WSZ9 112 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 BUB3O43684 328 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 IFNA17P01571 189 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 RLN2P04090 185 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 CXCL2P19875 107 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 RND2P52198 227 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 AP2S1P53680 142 aaPredicted RBP6.75□□□□□ -1.33
MCF2L-223ENST00000473345 PAX9P55771 341 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 TAS2R30P59541 319 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 ZNF345Q14585 488 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 RNF212Q495C1 297 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 LRRC37A5PQ49AS3 106 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 RNASE11Q8TAA1 199 aaKnown RBP6.75□□□□□ -1.33
MCF2L-223ENST00000473345 C20orf173Q96LM9 149 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 AQP10Q96PS8 301 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 NIPSNAP3BQ9BS92 247 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 SCRT2Q9NQ03 307 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
MCF2L-223ENST00000473345 YTHDF2Q9Y5A9 579 aaKnown RBP6.75□□□□□ -1.33
MCF2L-223ENST00000473345 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 E5RGE8 158 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 SYNGR2O43760 224 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 NPY1RP25929 384 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 NUP62P37198 522 aaPredicted RBP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 HOXA1P49639 335 aaPredicted RBP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 OR2F1Q13607 317 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 ACOT7LQ6ZUV0 252 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 KCNRGQ8N5I3 272 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 SMIM8Q96KF7 97 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 SAV1Q9H4B6 383 aaPredicted RBP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 NRN1Q9NPD7 142 aa6.74□□□□□ -1.33
MCF2L-223ENST00000473345 LSM5Q9Y4Y9 91 aaKnown RBP6.74□□□□□ -1.33
MCF2L-223ENST00000473345 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 FXYD6-FXYD2A0A087WZ82 144 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 A0A0D9SG52 128 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 PLAC8L1A1L4L8 177 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 MED6O75586 246 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 IL4P05112 153 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
MCF2L-223ENST00000473345 OR10J1P30954 320 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 S100A10P60903 97 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 SPCS3P61009 180 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
MCF2L-223ENST00000473345 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 SIGLEC15Q6ZMC9 328 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 OR51G1Q8NGK1 321 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 FAM210BQ96KR6 192 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 C1QTNF4Q9BXJ3 329 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 MAGT1Q9H0U3 335 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 RBKSQ9H477 322 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 ENY2Q9NPA8 101 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 LYRM2Q9NU23 88 aaPredicted RBP6.73□□□□□ -1.33
MCF2L-223ENST00000473345 PFDN2Q9UHV9 154 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 RFNGQ9Y644 331 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
MCF2L-223ENST00000473345 LOC102723971A0A1B0GUV8 181 aa6.72□□□□□ -1.33
MCF2L-223ENST00000473345 ARPC5O15511 151 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms