RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 LGALS4P56470 323 aa12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 UBE2L3P68036 154 aaKnown RBP12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 RHOGP84095 191 aa12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 SSBP4Q9BWG4 385 aaPredicted RBP12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 ONECUT1Q9UBC0 465 aa12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 IGF2RP11717 2491 aa12.96□□□□□ -0.33
PIKFYVE-206ENST00000443896 GAGE10A6NGK3 116 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 PAX2Q02962 417 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 RUSC1-AS1Q66K80 236 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 RNF5Q99942 180 aa12.96□□□□□ -0.34
PIKFYVE-206ENST00000443896 TRAV9-1A0A075B6T8 112 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 BMPR1BO00238 502 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 BVES-AS1Q5T3Y7 98 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 TIMD4Q96H15 378 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 TEX22C9J3V5 150 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 BMI1P35226 326 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 LINC00173Q6ZV60 143 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 SPTA1P02549 2419 aa12.95□□□□□ -0.34
PIKFYVE-206ENST00000443896 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 TRGV9Q99603 122 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 PAXXQ9BUH6 204 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 FBXL15Q9H469 300 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 V9GYV3 84 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 PLXNB1O43157 2135 aa12.94□□□□□ -0.34
PIKFYVE-206ENST00000443896 APELAP0DMC3 54 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 PYYP10082 97 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 SLAQ13239 276 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 IGF2BP2-AS1Q96M15 143 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 THYN1Q9P016 225 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 RPL24P83731 157 aaKnown RBP12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 FAM231BA6NCW3 169 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 FAM181BA6NEQ2 426 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 MOSP00540 346 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 TIGITQ495A1 244 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 LINC00305Q7Z4B0 112 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 CDC42EP3Q9UKI2 254 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 HILPDAQ9Y5L2 63 aa12.93□□□□□ -0.34
PIKFYVE-206ENST00000443896 IGLV2-8P01709 118 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 CAMPP49913 170 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 ZZEF1O43149 2961 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 LRBAP50851 2863 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 TIMM23O14925 209 aa12.92□□□□□ -0.34
PIKFYVE-206ENST00000443896 HTR1DP28221 377 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 ARF6P62330 175 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 DCHS2Q6V1P9 2916 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 M0R1W7 72 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 UBE2G1P62253 170 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 PERPQ96FX8 193 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 OSTCQ9NRP0 149 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 C7orf71A4D174 169 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 APCSP02743 223 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 ZNF329Q86UD4 541 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 DTX2Q86UW9 622 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 STXBP6Q8NFX7 210 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 SRSF8Q9BRL6 282 aaKnown RBP12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 DPM3Q9P2X0 92 aa12.91□□□□□ -0.34
PIKFYVE-206ENST00000443896 ORM2P19652 201 aa12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 FOXA3P55318 350 aaPredicted RBP12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 ABCA4P78363 2273 aa12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 ISLRO14498 428 aa12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 CFHR4Q92496 578 aa12.9□□□□□ -0.34
PIKFYVE-206ENST00000443896 IGHV3-21A0A0B4J1V1 117 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 H3BUT2 72 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 PLP1P60201 277 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 PLGLAQ15195 96 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 AZU1P20160 251 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 MYCNOSP40205 109 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 C18orf32Q8TCD1 76 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 FAM168AQ92567 244 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 PRTN3P24158 256 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 GNB1LQ9BYB4 327 aa12.89□□□□□ -0.35
PIKFYVE-206ENST00000443896 CEACAM3P40198 252 aa12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 I3L2K1 104 aa12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 IGLC1P0CG04 106 aa12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 SLC25A34Q6PIV7 304 aa12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 LINC00479Q96M42 142 aa12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
PIKFYVE-206ENST00000443896 G3V4G9 280 aa12.87□□□□□ -0.35
PIKFYVE-206ENST00000443896 PEX7O00628 323 aa12.87□□□□□ -0.35
PIKFYVE-206ENST00000443896 KLRD1Q13241 179 aa12.87□□□□□ -0.35
PIKFYVE-206ENST00000443896 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
PIKFYVE-206ENST00000443896 NBR2O15453 112 aa12.87□□□□□ -0.35
PIKFYVE-206ENST00000443896 NPBQ8NG41 125 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms