RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
SEC16A-206ENST00000431893 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
SEC16A-206ENST00000431893 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
SEC16A-206ENST00000431893 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 SSC4DQ8WTU2 575 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-206ENST00000431893 PSME4Q14997 1843 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 H3BMM0 161 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 ADCYAP1P18509 176 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 NEGR1Q7Z3B1 354 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 RNASE6Q93091 150 aaKnown RBP9.33□□□□□ -0.92
SEC16A-206ENST00000431893 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 KLHDC3Q9BQ90 382 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 KLF12Q9Y4X4 402 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 NYNRINQ9P2P1 1898 aaKnown RBP9.33□□□□□ -0.92
SEC16A-206ENST00000431893 IGHV1-8P0DP01 117 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 RP1P56715 2156 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 MPDZO75970 2070 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 VCYO14598 125 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 TMEM242Q9NWH2 141 aa9.33□□□□□ -0.92
SEC16A-206ENST00000431893 ZNF672Q499Z4 452 aaPredicted RBP9.32□□□□□ -0.92
SEC16A-206ENST00000431893 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 ARMS2P0C7Q2 107 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 H3BUX3 64 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 K7ERJ3 54 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 KLHL30-AS1Q8NEE0 82 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 COL4A5P29400 1685 aa9.32□□□□□ -0.92
SEC16A-206ENST00000431893 DOCK4Q8N1I0 1966 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 H0YJW9 148 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 EFNA2O43921 213 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 PMVKQ15126 192 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
SEC16A-206ENST00000431893 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 A0A1B0GWJ7 208 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 NXPH4O95158 308 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
SEC16A-206ENST00000431893 IL17RELQ6ZVW7 336 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 A0A096LPF7 62 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 NPSP0C0P6 89 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 GAGE4Q13068 117 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 GAGE5Q13069 117 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
SEC16A-206ENST00000431893 RUSC1-AS1Q66K80 236 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
SEC16A-206ENST00000431893 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
SEC16A-206ENST00000431893 TMEM105Q8N8V8 129 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 SNHG12Q9BXW3 62 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 SLC25A16P16260 332 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 WIPF3A6NGB9 483 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 CRYGSP22914 178 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 SS18Q15532 418 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 MAPK1IP1LQ8NDC0 245 aa9.3□□□□□ -0.92
SEC16A-206ENST00000431893 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 HAMPP81172 84 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 TINCRA0A1B0GVN0 87 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 CYYR1Q96J86 154 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 TRGV9Q99603 122 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 MST1P26927 711 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 Q86TA4 180 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 ARID2Q68CP9 1835 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 SYNJ2BPP57105 145 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 SPSB3Q6PJ21 355 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 C20orf204Q6ZNR8 217 aa9.29□□□□□ -0.92
SEC16A-206ENST00000431893 COL11A2P13942 1736 aaPredicted RBP9.29□□□□□ -0.92
SEC16A-206ENST00000431893 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-206ENST00000431893 NMSQ5H8A3 153 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 GAFA1Q96PS6 74 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 GAS1P54826 345 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 GGNQ86UU5 652 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 PARP14Q460N5 1801 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 BUB1B-PAK6H3BSN5 160 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 CD5LO43866 347 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 CSRP2Q16527 193 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 LIME1Q9H400 295 aa9.28□□□□□ -0.92
SEC16A-206ENST00000431893 C9JQL5 133 aa9.27□□□□□ -0.92
SEC16A-206ENST00000431893 IGKV1-16P04430 117 aa9.27□□□□□ -0.92
SEC16A-206ENST00000431893 LHFPL1Q86WI0 220 aa9.27□□□□□ -0.92
SEC16A-206ENST00000431893 FLVCR1-AS1Q8TAF5 88 aa9.27□□□□□ -0.92
SEC16A-206ENST00000431893 COL8A2P25067 703 aa9.27□□□□□ -0.93
SEC16A-206ENST00000431893 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
SEC16A-206ENST00000431893 SOCS3O14543 225 aa9.27□□□□□ -0.93
SEC16A-206ENST00000431893 TMEM126AQ9H061 195 aa9.27□□□□□ -0.93
SEC16A-206ENST00000431893 A0A1B0GW64 132 aa9.26□□□□□ -0.93
SEC16A-206ENST00000431893 DEFB131AP59861 70 aa9.26□□□□□ -0.93
SEC16A-206ENST00000431893 ATP6V0BQ99437 205 aa9.26□□□□□ -0.93
SEC16A-206ENST00000431893 MRPS18CQ9Y3D5 142 aaKnown RBP9.26□□□□□ -0.93
SEC16A-206ENST00000431893 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms