RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 ARL5AQ9Y689 179 aa0.24□□□□□ -2.37
TIMM9P3-201ENST00000428659 MUC5ACP98088 5654 aa0.24□□□□□ -2.37
TIMM9P3-201ENST00000428659 SBF1O95248 1867 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 TRBV30A0A0K0K1B3 111 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 SRIP30626 198 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 ATP5G3P48201 142 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 DYNLT3P51808 116 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 HSPE1P61604 102 aaKnown RBP0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 TAF1AQ15573 450 aaPredicted RBP0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 LINC00299Q6ZSB3 139 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 ARPINQ7Z6K5 226 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 CROCCP2Q86T23 111 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 LRRC18Q8N456 261 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 PPTC7Q8NI37 304 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 STAG3L4Q8TBR4 150 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 ZHX1-C8orf76Q96EF9 292 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 HYLS1Q96M11 299 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 WFDC10AQ9H1F0 79 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 POPDC3Q9HBV1 291 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 PYCARDQ9ULZ3 195 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
TIMM9P3-201ENST00000428659 COL1A1P02452 1464 aaPredicted RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 TRAV23DV6A0A075B6W5 121 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 TRAV5A0A0B4J249 113 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 G3V2T6 193 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 TMEM256-PLSCR3K7ERE1 68 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 M0R378 163 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 GPR31O00270 319 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 BANF1O75531 89 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 PPYP01298 95 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 NFYBP25208 207 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 ZNF137PP52743 207 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 FOXA3P55318 350 aaPredicted RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 DEFA3P59666 94 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 FADDQ13158 208 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 AKR1C8PQ5T2L2 129 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 GRPEL2Q8TAA5 225 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 TSKUQ8WUA8 353 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 CHCHD1Q96BP2 118 aaKnown RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 MALSU1Q96EH3 234 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 C9orf16Q9BUW7 83 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 CCDC94Q9BW85 323 aaPredicted RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 PARD6GQ9BYG4 376 aaPredicted RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 OR2J1Q9GZK6 312 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 UCK1Q9HA47 277 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 CACYBPQ9HB71 228 aaKnown RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 SSR3Q9UNL2 185 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 ZFC3H1O60293 1989 aaKnown RBP0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 EML6Q6ZMW3 1958 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 CNTRLQ7Z7A1 2325 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 ARHGEF11O15085 1522 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 ECM29Q5VYK3 1845 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 CECR2Q9BXF3 1484 aa0.22□□□□□ -2.37
TIMM9P3-201ENST00000428659 DENND4CQ5VZ89 1909 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 DOCK5Q9H7D0 1870 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 hDV103S1A0JD37 113 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 RIIAD1A6NNX1 92 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 ZNF727A8MUV8 499 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 H7C1C5 153 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 HIST1H2BKO60814 126 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 ATP5HO75947 161 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 HIST1H2BJP06899 126 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 CST2P09228 141 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 SERPINB9P50453 376 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 NCALDP61601 193 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 LCN6P62502 163 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 KLRD1Q13241 179 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 C1orf134Q5TEV5 83 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 Q6ZQY7 126 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 C5orf17Q8NAS9 161 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 NEK7Q8TDX7 302 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 POP5Q969H6 163 aaKnown RBP0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 CEP19Q96LK0 163 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 PRAP1Q96NZ9 151 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 PBDC1Q9BVG4 233 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 LAMTOR3Q9UHA4 124 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 EML5Q05BV3 1969 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 CCDC144AA2RUR9 1427 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 E9PCH4 1651 aa0.21□□□□□ -2.38
TIMM9P3-201ENST00000428659 SNRNP200O75643 2136 aaKnown RBP0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 CCDC88AQ3V6T2 1871 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 HECW2Q9P2P5 1572 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 TNRC6AQ8NDV7 1962 aaKnown RBP0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 TMEM210A6NLX4 147 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 K7EIL1 84 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 S100A6P06703 90 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 CCL4P13236 92 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 OGNP20774 298 aaKnown RBP0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 PHBP35232 272 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 PPP1R2P41236 205 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 SPINT3P49223 89 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 QRFPP83859 136 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 EIF3IQ13347 325 aaKnown RBP0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 C6orf52Q5T4I8 152 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 CHMP6Q96FZ7 201 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 AP1S3Q96PC3 154 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 MCEEQ96PE7 176 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 SMR3AQ99954 134 aa0.2□□□□□ -2.38
TIMM9P3-201ENST00000428659 GGACTQ9BVM4 153 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms