RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 LINC00471Q8N535 108 aa3.62□□□□□ -1.83
PTP4A1P1-201ENST00000420539 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MCEEQ96PE7 176 aa3.62□□□□□ -1.83
PTP4A1P1-201ENST00000420539 SMDT1Q9H4I9 107 aa3.62□□□□□ -1.83
PTP4A1P1-201ENST00000420539 CCDC18Q5T9S5 1454 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 DOCK8Q8NF50 2099 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 BRWD3Q6RI45 1802 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 IGLV3-9A0A075B6K5 115 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 TRBV20-1A0A075B6N2 111 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MT3P25713 68 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 DYNLT1P63172 113 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 SUPT4H1P63272 117 aaKnown RBP3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MRPL54Q6P161 138 aaKnown RBP3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 FOXI2Q6ZQN5 318 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 C2orf91Q6ZV80 131 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 TTC9CQ8N5M4 171 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PKMYT1Q99640 499 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 AGPAT4-IT1Q9H0P7 198 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 SLC35B3Q9H1N7 401 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ZNF443Q9Y2A4 671 aaPredicted RBP3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MYH6P13533 1939 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 RIMBP3CA6NJZ7 1639 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 RIMBP3BA6NNM3 1639 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 RIMBP3Q9UFD9 1639 aa3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 TROQ12816 1431 aaPredicted RBP3.61□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ADGRL2O95490 1459 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 COL1A1P02452 1464 aaPredicted RBP3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 QRICH2Q9H0J4 1663 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 IGKV1D-37A0A075B6S9 117 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PNMA8CA0A1B0GUJ8 204 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 H3BT86 120 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 OR1I1O60431 355 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 FOXA1P55317 472 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 GTF3C1Q12789 2109 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 KLRD1Q13241 179 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 CDK5R1Q15078 307 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 UBE2SQ16763 222 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 LYZL2Q7Z4W2 148 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MUC7Q8TAX7 377 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 IMMP2LQ96T52 175 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 SEC11CQ9BY50 192 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 NAA60Q9H7X0 242 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 BCORL1Q5H9F3 1711 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 NUP98P52948 1817 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ARHGAP35Q9NRY4 1499 aa3.6□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PLXNB1O43157 2135 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ARHGEF28Q8N1W1 1705 aaKnown RBP3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 KIAA1551Q9HCM1 1747 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PHIPQ8WWQ0 1821 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 A0A096LNJ9 63 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 IGHV3-15A0A0B4J1V0 119 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 A0A1W2PQD3 144 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PHOX2AO14813 284 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 GEMIN2O14893 280 aaKnown RBP3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 PITX3O75364 302 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 TCL1BO95988 128 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 IFITM1P13164 125 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ZNF19P17023 458 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MPV17P39210 176 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 RPL28P46779 137 aaKnown RBP3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 XCL1P47992 114 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 ZNF90Q03938 601 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 KHDC3LQ587J8 217 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 Q6ZR03 302 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 Q6ZUT4 128 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 FAM216BQ8N7L0 139 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 RNF5Q99942 180 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 FKBP11Q9NYL4 201 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 CHCHD2Q9Y6H1 151 aaPredicted RBP3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 MYH9P35579 1960 aaKnown RBP3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 CITO14578 2027 aa3.59□□□□□ -1.83
PTP4A1P1-201ENST00000420539 POLEQ07864 2286 aa3.59□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TRPM1Q7Z4N2 1603 aa3.59□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TP53BP1Q12888 1972 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 A0A0D9SG52 128 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 IGLV1-47P01700 117 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 CD3DP04234 171 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MSMBP08118 114 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TPT1P13693 172 aaKnown RBP3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 KRTAP10-9P60411 292 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 LSM3P62310 102 aaKnown RBP3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q56UQ5 140 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 Q5W150 140 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 C10orf111Q8N326 155 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 COPS9Q8WXC6 57 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 SAR1AQ9NR31 198 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 MAPKBP1O60336 1514 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 ZNF646O15015 1829 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 WNK3Q9BYP7 1800 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 KIF13AQ9H1H9 1805 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 AKAP11Q9UKA4 1901 aa3.58□□□□□ -1.84
PTP4A1P1-201ENST00000420539 TRBV6-6A0A0A6YYG2 114 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms