RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PRO0461Q9UI25 63 aa2.59□□□□□ -1.99
SDCBPP3-201ENST00000419629 PILRAQ9UKJ1 303 aa2.59□□□□□ -1.99
SDCBPP3-201ENST00000419629 HILPDAQ9Y5L2 63 aa2.59□□□□□ -1.99
SDCBPP3-201ENST00000419629 HLA-DRB4X5D2U9 266 aa2.59□□□□□ -1.99
SDCBPP3-201ENST00000419629 CASP8AP2Q9UKL3 1982 aa2.59□□□□□ -2
SDCBPP3-201ENST00000419629 CHD3Q12873 2000 aaKnown RBP2.59□□□□□ -2
SDCBPP3-201ENST00000419629 CCDC88CQ9P219 2028 aa2.59□□□□□ -2
SDCBPP3-201ENST00000419629 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LCTP09848 1927 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PLXND1Q9Y4D7 1925 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 TRAV5A0A0B4J249 113 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 TRGV8A0A0C4DH27 118 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 SHISA9B4DS77 424 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 C21orf140B9A014 251 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LMO7DNF2Z398 122 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 C15orf65H3BRN8 121 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 K7EN84 100 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 TNFSF11O14788 317 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 DUX1O43812 170 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PDCD6O75340 191 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 DHRS3O75911 302 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 SLC25A5P05141 298 aaKnown RBP2.58□□□□□ -2
SDCBPP3-201ENST00000419629 FGF6P10767 208 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 CTLA4P16410 223 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 OPRK1P41145 380 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 KIR2DS2P43631 304 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 EMDP50402 254 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 UCNP55089 124 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 RPS15AP62244 130 aaKnown RBP2.58□□□□□ -2
SDCBPP3-201ENST00000419629 ATP5G2Q06055 141 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 HES1Q14469 280 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 WFDC2Q14508 124 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PSG5Q15238 335 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 KISS1Q15726 138 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LGALS9BQ3B8N2 356 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 CENPWQ5EE01 88 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 SPANXN5Q5MJ07 72 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 IBA57Q5T440 356 aaKnown RBP2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LGALS9CQ6DKI2 356 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 DGAT2L6Q6ZPD8 337 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 Q6ZR54 194 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 FAM231DQ6ZW35 169 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 SSX8Q7RTT4 187 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 C6orf201Q7Z4U5 140 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 HSD11B1LQ7Z5J1 315 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PPP1R27Q86WC6 154 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 NUP35Q8NFH5 326 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 VN1R2Q8NFZ6 395 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PIFOQ8TCI5 191 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LRRC29Q8WV35 223 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 RDH5Q92781 318 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 BADQ92934 168 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 FAM131CQ96AQ9 280 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 RAB37Q96AX2 223 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 BMFQ96LC9 184 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 PRELID3AQ96N28 172 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 CDX2Q99626 313 aaPredicted RBP2.58□□□□□ -2
SDCBPP3-201ENST00000419629 C20orf78Q9BR46 151 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 NPCDR1Q9BY65 106 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LIME1Q9H400 295 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 FAM60AQ9NP50 221 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 ENY2Q9NPA8 101 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LSM7Q9UK45 103 aaKnown RBP2.58□□□□□ -2
SDCBPP3-201ENST00000419629 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 LHFPL6Q9Y693 200 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 MYO16Q9Y6X6 1858 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 SCN2AQ99250 2005 aa2.58□□□□□ -2
SDCBPP3-201ENST00000419629 NUP210Q8TEM1 1887 aaPredicted RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 TRBV20OR9-2A0A075B6H5 130 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF816-ZNF321PA0A0X1KG74 233 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 A0A1W2PPV9 198 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 OOEPA6NGQ2 149 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 GGTLC3B5MD39 225 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 IGLL5B9A064 214 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 ATP5G1P05496 136 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 CRYGBP07316 175 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF688P0C7X2 276 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 IAPPP10997 89 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 PRTN3P24158 256 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 CFHR2P36980 270 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 MPV17P39210 176 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 MFAP2P55001 183 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF121P58317 390 aaPredicted RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 RPL30P62888 115 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 RPL31P62899 125 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 HBBP68871 147 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 GUSBP1Q15486 140 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 RRN3P1Q2M238 152 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 TBC1D28Q2M2D7 210 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 MEIG1Q5JSS6 88 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 PLPP4Q5VZY2 271 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 Q6P435 159 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 TEN1Q86WV5 123 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 GAPTQ8N292 157 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 CSNK1G2-AS1Q8NCQ2 148 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 PIGCQ92535 297 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 DLX4Q92988 240 aaPredicted RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 RPEQ96AT9 228 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms