RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZNF705GA8MUZ8 300 aaPredicted RBP10.46□□□□□ -0.73
RPS28-201ENST00000417088 CRXO43186 299 aaPredicted RBP10.46□□□□□ -0.73
RPS28-201ENST00000417088 SFT2D2O95562 160 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 PRM2P04554 102 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.73
RPS28-201ENST00000417088 RPP30P78346 268 aaKnown RBP10.46□□□□□ -0.73
RPS28-201ENST00000417088 SOHLH1Q5JUK2 328 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 IGFL4Q6B9Z1 124 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 GPR82Q96P67 336 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 TMEM147Q9BVK8 224 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 TMED3Q9Y3Q3 217 aa10.46□□□□□ -0.73
RPS28-201ENST00000417088 H3BMQ9 156 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 M0R2Z0 102 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
RPS28-201ENST00000417088 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 SPANXN5Q5MJ07 72 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 ZNF575Q86XF7 245 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 TOMM5Q8N4H5 51 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 RNF182Q8N6D2 247 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 MCFD2Q8NI22 146 aa10.45□□□□□ -0.74
RPS28-201ENST00000417088 SLC25A21Q9BQT8 299 aaPredicted RBP10.45□□□□□ -0.74
RPS28-201ENST00000417088 H3BP45 60 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 INSP01308 110 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 HOXB5P09067 269 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 AP3S2P59780 193 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 AKR1C1Q04828 323 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 C1orf134Q5TEV5 83 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 ACOT7LQ6ZUV0 252 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 TMEM144Q7Z5S9 345 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
RPS28-201ENST00000417088 LYRM9A8MSI8 78 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 H3BRN7 92 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 S100A7P31151 101 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 FAM3BP58499 235 aaPredicted RBP10.43□□□□□ -0.74
RPS28-201ENST00000417088 FGL1Q08830 312 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 PYDC2Q56P42 97 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 BAP18Q8IXM2 172 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 SLC25A39Q9BZJ4 359 aaPredicted RBP10.43□□□□□ -0.74
RPS28-201ENST00000417088 STRAPQ9Y3F4 350 aaKnown RBP10.43□□□□□ -0.74
RPS28-201ENST00000417088 V9GYH0 126 aa10.43□□□□□ -0.74
RPS28-201ENST00000417088 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 NOL3O60936 208 aaKnown RBP10.42□□□□□ -0.74
RPS28-201ENST00000417088 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 AZU1P20160 251 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 TSPOP30536 169 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 B2MP61769 119 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 ID3Q02535 119 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 CYP2G1PQ6ZSU1 146 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 ZNF738Q8NE65 137 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
RPS28-201ENST00000417088 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 SMCO3A2RU48 225 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 BOLA2-SMG1P6H3BVE0 249 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 IL5P05113 134 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 RAP2BP61225 183 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 FCN2Q15485 313 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 ATG101Q9BSB4 218 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
RPS28-201ENST00000417088 HSPG2P98160 4391 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 PMS2P5A8MQ11 134 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 HYPMO75409 117 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 ADAP1O75689 374 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 RPL7P18124 248 aaKnown RBP10.4□□□□□ -0.74
RPS28-201ENST00000417088 CXCL3P19876 107 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 PLP1P60201 277 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
RPS28-201ENST00000417088 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
RPS28-201ENST00000417088 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 C9orf170A2RU37 121 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 F5H768 121 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 OR5G3P0C626 314 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 LINC00869P0C866 280 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 RHOBP62745 196 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 HIST1H1AQ02539 215 aaPredicted RBP10.39□□□□□ -0.75
RPS28-201ENST00000417088 TNP2Q05952 138 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 PSG3Q16557 428 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 LINC01587Q99440 93 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 PSENENQ9NZ42 101 aa10.39□□□□□ -0.75
RPS28-201ENST00000417088 A0A087X0K7 114 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 CBY3A6NI87 242 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 CCNKO75909 580 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 NUDT3O95989 172 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 ATP5G1P05496 136 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 ATP5G3P48201 142 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 TAS2R60P59551 318 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
RPS28-201ENST00000417088 SELENOTP62341 195 aa10.38□□□□□ -0.75
RPS28-201ENST00000417088 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
RPS28-201ENST00000417088 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
RPS28-201ENST00000417088 RRAS2P62070 204 aaPredicted RBP10.37□□□□□ -0.75
RPS28-201ENST00000417088 DLK1P80370 383 aa10.37□□□□□ -0.75
RPS28-201ENST00000417088 PATE2Q6UY27 113 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms