RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 AGMATQ9BSE5 352 aa13.58□□□□□ -0.24
PCDHA13-202ENST00000409494 A0A1W2PNU3 283 aaPredicted RBP13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 C15orf65H3BRN8 121 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 FOXL1Q12952 345 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 PYY3Q5JQD4 70 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 C1orf194Q5T5A4 169 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 BDP1A6H8Y1 2624 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 WNK2Q9Y3S1 2297 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 HIGD1CA8MV81 97 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 IGHV2-5P01817 119 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 LOC102724200A0A096LPH7 203 aaPredicted RBP13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 K7EM74 188 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 PRDM13Q9H4Q3 707 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
PCDHA13-202ENST00000409494 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 ELANEP08246 267 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 FAM90A2PQ658T7 463 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 GNB1LQ9BYB4 327 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 A0A1W2PPI3 338 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 NPIPB5A8MRT5 1133 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 NXT2Q9NPJ8 142 aaKnown RBP13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 H3BRM9 83 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 C10orf91Q5T1B1 145 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 TSKUQ8WUA8 353 aa13.56□□□□□ -0.24
PCDHA13-202ENST00000409494 CADP27708 2225 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 OBSL1O75147 1896 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 OR11H12B2RN74 326 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 WIPF3A6NGB9 483 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 LCNL1Q6ZST4 164 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 CIDEAO60543 219 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
PCDHA13-202ENST00000409494 TCRAP04437 139 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 RASL11AQ6T310 242 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 LIME1Q9H400 295 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 ST20Q9HBF5 79 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 FABP2P12104 132 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 TMEM262E9PQX1 116 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 CD33P20138 364 aa13.54□□□□□ -0.24
PCDHA13-202ENST00000409494 TMEM50AO95807 157 aa13.53□□□□□ -0.24
PCDHA13-202ENST00000409494 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
PCDHA13-202ENST00000409494 SCRT1Q9BWW7 348 aa13.53□□□□□ -0.24
PCDHA13-202ENST00000409494 GNG5P63218 68 aa13.53□□□□□ -0.24
PCDHA13-202ENST00000409494 OR10J3Q5JRS4 329 aa13.53□□□□□ -0.24
PCDHA13-202ENST00000409494 ATP6V0E1O15342 81 aa13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 LHBP01229 141 aa13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 ZNF415Q09FC8 603 aa13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 KLF17Q5JT82 389 aaPredicted RBP13.52□□□□□ -0.24
PCDHA13-202ENST00000409494 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
PCDHA13-202ENST00000409494 LHFPL4Q7Z7J7 247 aa13.52□□□□□ -0.25
PCDHA13-202ENST00000409494 OR11H1Q8NG94 326 aa13.52□□□□□ -0.25
PCDHA13-202ENST00000409494 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.25
PCDHA13-202ENST00000409494 OR11H2Q8NH07 326 aa13.52□□□□□ -0.25
PCDHA13-202ENST00000409494 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 SCGB3A1Q96QR1 104 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 SEPSECSQ9HD40 501 aaKnown RBP13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 SUMO2P61956 95 aaKnown RBP13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 ADORA2A-AS1P86434 159 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 C11orf44Q8N8P7 122 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 LAMTOR2Q9Y2Q5 125 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 COL4A4P53420 1690 aaPredicted RBP13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 TRGV4A0A0C4DH28 118 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 LINC01619G3V211 115 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 NDUFA4O00483 81 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 RUSC1-AS1Q66K80 236 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 PRORYQ9H606 182 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 DCAF16Q9NXF7 216 aa13.51□□□□□ -0.25
PCDHA13-202ENST00000409494 IL15RAQ13261 267 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 PSG3Q16557 428 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 SSBP4Q9BWG4 385 aaPredicted RBP13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 MALRD1Q5VYJ5 2156 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 ACACBO00763 2458 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 A0A1B0GUS0 222 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 INSP01308 110 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 ZNF329Q86UD4 541 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 C11orf53Q8IXP5 236 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
PCDHA13-202ENST00000409494 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 PRSS2P07478 247 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms