RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 LTBP2Q14767 1821 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 CIDEAO60543 219 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 SH2D1AO60880 128 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 FOXA3P55318 350 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 LINC00205P59089 165 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 DLX4Q92988 240 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 SRSF4Q08170 494 aaKnown RBP4.01□□□□□ -1.77
SCN3A-203ENST00000409101 SPINK13Q1W4C9 94 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-203ENST00000409101 C5orf24Q7Z6I8 188 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 Q8NFD4 153 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PGPEP1Q9NXJ5 209 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 KLK9Q9UKQ9 250 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GZMBP10144 247 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 EVI2AP22794 236 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 DEFB136Q30KP8 78 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 S100A7L2Q5SY68 101 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 C1orf194Q5T5A4 169 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PRSS57Q6UWY2 283 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 C8orf31Q8N9H6 132 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GGTLC1Q9BX51 225 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF581Q9P0T4 197 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 KNL1Q8NG31 2342 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 LDLRAD4O15165 306 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 DKK1O94907 266 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 LINC00158P58513 81 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PMCHL1Q16048 86 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 VWC2Q2TAL6 325 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM95Q3KNT9 176 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 DMRTA1Q5VZB9 504 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 LINC00469Q8N7U9 141 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 OR11H6Q8NGC7 330 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 CTSZQ9UBR2 303 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PLXNA2O75051 1894 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PIKFYVEQ9Y2I7 2098 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 DNAJC9-AS1A6NH13 148 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 CDK2AP2O75956 126 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PPBPP02775 128 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE1Q13065 139 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE4Q13068 117 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE5Q13069 117 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE13Q4V321 117 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 GFI1BQ5VTD9 330 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 HIST2H2BCQ6DN03 193 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 RNF144BQ7Z419 303 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 RNF182Q8N6D2 247 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 Q8TAT8 98 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PRO1933Q9H354 126 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 JKAMPQ9P055 326 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 TRAV9-1A0A075B6T8 112 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 TCRAP04437 139 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 NTF4P34130 210 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 SLURP1P55000 103 aa4.01□□□□□ -1.77
SCN3A-203ENST00000409101 PHLDA1Q8WV24 401 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-203ENST00000409101 RNASE7Q9H1E1 156 aaKnown RBP4.01□□□□□ -1.77
SCN3A-203ENST00000409101 SCN2AQ99250 2005 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
SCN3A-203ENST00000409101 QRFPP83859 136 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 SPATA45Q537H7 98 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 NDUFA4L2Q9NRX3 87 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 LINC01549A6NIU2 74 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 FHL1Q13642 323 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 PIFOQ8TCI5 191 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 C4orf3Q8WVX3 66 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 SMAD5-AS1Q9Y6J3 95 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 FNDC10F2Z333 226 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 LY6G6DO95868 133 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 CBLN1P23435 193 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 SLAQ13239 276 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 SHISA2Q6UWI4 295 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 WFDC11Q8NEX6 87 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 PMCHL2Q9BQD1 86 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM14BQ9NUH8 114 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 PKIGQ9Y2B9 76 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 KNTC1P50748 2209 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 TRBV25-1A0A075B6N4 114 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV1OR15-1A0A075B7D0 117 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 RHODO00212 210 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 TRGC2P03986 189 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV4-31P0DP07 118 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 C12orf57Q99622 126 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
SCN3A-203ENST00000409101 A0A087WWL8 130 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 IFITM3Q01628 133 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 PDE6HQ13956 83 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 DIAPH2-AS1Q14236 149 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 FOXI2Q6ZQN5 318 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 SEM1Q6ZVN7 128 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 NDUFA11Q86Y39 141 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 RASL10AQ92737 203 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 CST9LQ9H4G1 147 aa4□□□□□ -1.77
SCN3A-203ENST00000409101 LSM4Q9Y4Z0 139 aaKnown RBP4□□□□□ -1.77
SCN3A-203ENST00000409101 LINC00587B1AMM8 73 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms