RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PPTC7Q8NI37 304 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 CANT1Q8WVQ1 401 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 MALSU1Q96EH3 234 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 LINC00526Q96FQ7 95 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 ZC2HC1AQ96GY0 325 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 GPX7Q96SL4 187 aaPredicted RBP0.72□□□□□ -2.29
CD47-203ENST00000398258 GPER1Q99527 375 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 BOLA2Q9H3K6 86 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 POPDC3Q9HBV1 291 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 MED11Q9P086 117 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 U3KQ87 197 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 KIAA0586Q9BVV6 1533 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 GAPVD1Q14C86 1478 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 ABCC10Q5T3U5 1492 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 ANAPC1Q9H1A4 1944 aa0.72□□□□□ -2.29
CD47-203ENST00000398258 KIAA0556O60303 1618 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 ABCC8Q09428 1581 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 THOC2Q8NI27 1593 aaKnown RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 CPS1P31327 1500 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 HMGXB3Q12766 1538 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 A8MWV9 139 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 GGCTO75223 188 aaKnown RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 DHFRP00374 187 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 APOA2P02652 100 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 CSN2P05814 226 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 HLA-EP13747 358 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 IDO1P14902 403 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 OGNP20774 298 aaKnown RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 ARPP19P56211 112 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 GRINAQ7Z429 371 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 ODF3Q96PU9 254 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 SELENOSQ9BQE4 189 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 TMEM70Q9BUB7 260 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 PBOV1Q9GZY1 135 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 PCBD2Q9H0N5 130 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 BIN3Q9NQY0 253 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 CHCHD2Q9Y6H1 151 aaPredicted RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 CCDC88BA6NC98 1476 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 PTPRMP28827 1452 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 LRRC9Q6ZRR7 1453 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 CDK12Q9NYV4 1490 aaPredicted RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 MYOFQ9NZM1 2061 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 POLEQ07864 2286 aa0.71□□□□□ -2.3
CD47-203ENST00000398258 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
CD47-203ENST00000398258 KDM5CP41229 1560 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 MAPKBP1O60336 1514 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 DENND4CQ5VZ89 1909 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 NCAPD3P42695 1498 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 ZCCHC6Q5VYS8 1495 aaKnown RBP0.7□□□□□ -2.3
CD47-203ENST00000398258 TCRBV4S1A1TA0A5B7 111 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 PPP5D1E7EU14 171 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 K7ERJ3 54 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 PGRMC1O00264 195 aaKnown RBP0.7□□□□□ -2.3
CD47-203ENST00000398258 IFNA14P01570 189 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 TRGC2P03986 189 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 CD2P06729 351 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 ROMO1P60602 79 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 MYL5Q02045 173 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 FKBP1CQ5VVH2 108 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 KRTAP26-1Q6PEX3 210 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 DCUN1D2Q6PH85 259 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 FAM19A2Q8N3H0 131 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 ST6GALNAC3Q8NDV1 305 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 TMEM254Q8TBM7 123 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 C4orf3Q8WVX3 66 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 CHCHD1Q96BP2 118 aaKnown RBP0.7□□□□□ -2.3
CD47-203ENST00000398258 CARD19Q96LW7 228 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 RASL12Q9NYN1 266 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 TAS2R7Q9NYW3 318 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 OR52A1Q9UKL2 312 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 RNF11Q9Y3C5 154 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 V9GYQ6 96 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 WDR97A6NE52 1622 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 SCRIBQ14160 1630 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 BLMP54132 1417 aaPredicted RBP0.7□□□□□ -2.3
CD47-203ENST00000398258 SCN10AQ9Y5Y9 1956 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 NWD1Q149M9 1564 aa0.7□□□□□ -2.3
CD47-203ENST00000398258 CLASP1Q7Z460 1538 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 TCOF1Q13428 1488 aaKnown RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 MAGI1Q96QZ7 1491 aaPredicted RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 NESP48681 1621 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 NHSL1Q5SYE7 1610 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 MAP1LC3B2A6NCE7 125 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 TLCD2A6NGC4 264 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 ZNF736B4DX44 427 aaPredicted RBP0.69□□□□□ -2.3
CD47-203ENST00000398258 M0R233 179 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 RER1O15258 196 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 RTL8BQ17RB0 113 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 C1orf134Q5TEV5 83 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 C1orf140Q5VVS0 124 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 PATE2Q6UY27 113 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 CROCCP2Q86T23 111 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 Q8N814 137 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 NUP35Q8NFH5 326 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 OR5D14Q8NGL3 314 aa0.69□□□□□ -2.3
CD47-203ENST00000398258 PATE1Q8WXA2 126 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms