RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CCDC71LQ8N9Z2 235 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 OR11H7Q8NGC8 314 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 LHFPL5Q8TAF8 219 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 CACFD1Q9UGQ2 172 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 BOLA1Q9Y3E2 137 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 CEBPZOSA8MTT3 80 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 M0R2Z0 102 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 DUSP14O95147 198 aaKnown RBP6.49□□□□□ -1.37
NEDD9-203ENST00000397378 CDS2O95674 445 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 AZU1P20160 251 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 PCP4P48539 62 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 RAB4BP61018 213 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-203ENST00000397378 SPINK13Q1W4C9 94 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 CCDC28AQ8IWP9 274 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 OR8I2Q8N0Y5 310 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 ARRDC1Q8N5I2 433 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 ZFAND1Q8TCF1 268 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 RXFP4Q8TDU9 374 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 RBPMSQ93062 196 aaKnown RBP6.49□□□□□ -1.37
NEDD9-203ENST00000397378 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 BCL7BQ9BQE9 202 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 TMEM222Q9H0R3 208 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 CACNG5Q9UF02 275 aa6.49□□□□□ -1.37
NEDD9-203ENST00000397378 MRPS16Q9Y3D3 137 aaKnown RBP6.49□□□□□ -1.37
NEDD9-203ENST00000397378 TIMM8BQ9Y5J9 83 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-203ENST00000397378 IGKV1D-37A0A075B6S9 117 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 ZFP92A6NM28 416 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 APOA1P02647 267 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 FABP1P07148 127 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 GCSHP23434 173 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 RPS19P39019 145 aaKnown RBP6.48□□□□□ -1.37
NEDD9-203ENST00000397378 CNN1P51911 297 aaKnown RBP6.48□□□□□ -1.37
NEDD9-203ENST00000397378 LINC00315P59091 139 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 LYZP61626 148 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 ZNF90Q03938 601 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 ESRGQ1W209 222 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 RNASE10Q5GAN6 216 aaKnown RBP6.48□□□□□ -1.37
NEDD9-203ENST00000397378 SNX29P2Q8IUI4 249 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 GLYATL2Q8WU03 294 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 GNPNAT1Q96EK6 184 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-203ENST00000397378 ZNF586Q9NXT0 402 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 U3KQ87 197 aa6.48□□□□□ -1.37
NEDD9-203ENST00000397378 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 SNRPGP15A8MWD9 76 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 H3BNG1 76 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 OR5AC1P0C628 307 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 TBPP20226 339 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 TGFBR1P36897 503 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 GPX4P36969 197 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-203ENST00000397378 GALR1P47211 349 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 TAS2R60P59551 318 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 GAMTQ14353 236 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 RNASE12Q5GAN4 147 aaKnown RBP6.47□□□□□ -1.37
NEDD9-203ENST00000397378 BAP18Q8IXM2 172 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
NEDD9-203ENST00000397378 OR4D5Q8NGN0 318 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 OR13C8Q8NGS7 320 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 OR10J6PQ8NGY7 276 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
NEDD9-203ENST00000397378 TRAV26-1A0A087WT03 109 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-203ENST00000397378 CD3DP04234 171 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 RAB4AP20338 218 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 BCAP31P51572 246 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 ATP5IP56385 69 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-203ENST00000397378 SAPCD1Q5SSQ6 148 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 LGI3Q8N145 548 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 LINC00612Q8N6U2 182 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 SLC35E1Q96K37 410 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 LINC01587Q99440 93 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 TRGV9Q99603 122 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 RSG1Q9BU20 258 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 SLC25A32Q9H2D1 315 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
NEDD9-203ENST00000397378 TRAV12-2A0A075B6T6 113 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 ZNF98A6NK75 572 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 GABARAPH6UMI1 98 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 ZNF701M0R085 212 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 ADAP1O75689 374 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 GABARAPO95166 117 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 CFDP00746 253 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 OXTP01178 125 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 SULT1A3P0DMM9 295 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 SULT1A4P0DMN0 295 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 ZNF182P17025 639 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 OR5I1Q13606 314 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 MEF2DQ14814 521 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 WDR73Q6P4I2 378 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM144Q7Z5S9 345 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms