RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ERCC8Q13216 396 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 F8VVB4 439 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 F8VWA3 439 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 PPBPP02775 128 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 OTOGLQ3ZCN5 2332 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 HOXA3O43365 443 aaPredicted RBP12.12□□□□□ -0.47
LRRK1-201ENST00000388948 PAX4O43316 350 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 TCF15Q12870 199 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 MORN3Q6PF18 240 aaPredicted RBP12.12□□□□□ -0.47
LRRK1-201ENST00000388948 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 TRGV9Q99603 122 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 HBDP02042 147 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 IGFL4Q6B9Z1 124 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 SS18Q15532 418 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 MST1LQ2TV78 715 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 PAX2Q02962 417 aa12.11□□□□□ -0.47
LRRK1-201ENST00000388948 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
LRRK1-201ENST00000388948 CLPSP04118 112 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 GZMBP10144 247 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 IGKV1D-8A0A087WSZ0 117 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 F8WEM9 126 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 Q8TAT8 98 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 PTPRDP23468 1912 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 WDR81Q562E7 1941 aa12.1□□□□□ -0.47
LRRK1-201ENST00000388948 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 TNCP24821 2201 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
LRRK1-201ENST00000388948 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
LRRK1-201ENST00000388948 FBLN5Q9UBX5 448 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 CFHR2P36980 270 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 TMEM95Q3KNT9 176 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 C10orf126Q8N4M7 172 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 TRAV9-2A0A087WT02 112 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 IGHV4-39P01824 125 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 C14orf144Q96I85 54 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 KLHDC3Q9BQ90 382 aa12.09□□□□□ -0.47
LRRK1-201ENST00000388948 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
LRRK1-201ENST00000388948 LAIR2Q6ISS4 152 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 NPC2P61916 151 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
LRRK1-201ENST00000388948 DOCK11Q5JSL3 2073 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 DPM2O94777 84 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 LINC00614P0C842 121 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 TCTEX1D4Q5JR98 221 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 TRAV13-1A0A0B4J241 112 aa12.08□□□□□ -0.48
LRRK1-201ENST00000388948 TYMSP04818 313 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 DEFB113Q30KQ7 82 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 SFTA2Q6UW10 78 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 TOMM40O96008 361 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 DLX4Q92988 240 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-201ENST00000388948 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 LSM4Q9Y4Z0 139 aaKnown RBP12.07□□□□□ -0.48
LRRK1-201ENST00000388948 GGTLC3B5MD39 225 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 SSBP2P81877 361 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-201ENST00000388948 CD300EQ496F6 205 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-201ENST00000388948 NHLRC3Q5JS37 347 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
LRRK1-201ENST00000388948 LINC00587B1AMM8 73 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 G3V318 75 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 SRSF4Q08170 494 aaKnown RBP12.06□□□□□ -0.48
LRRK1-201ENST00000388948 ZNF562Q6V9R5 426 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 A0A087WWL8 130 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 LAGE3Q14657 143 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 LHBP01229 141 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 SPINK13Q1W4C9 94 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 RFNGQ9Y644 331 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 AMBPP02760 352 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 SUPT4H1P63272 117 aaKnown RBP12.06□□□□□ -0.48
LRRK1-201ENST00000388948 Q6P435 159 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
LRRK1-201ENST00000388948 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
LRRK1-201ENST00000388948 LINC00205P59089 165 aa12.06□□□□□ -0.48
LRRK1-201ENST00000388948 C14orf178Q8N769 122 aaPredicted RBP12.06□□□□□ -0.48
LRRK1-201ENST00000388948 TRAV9-1A0A075B6T8 112 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 C5orf63A6NC05 138 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 IGKV1-16P04430 117 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 ID3Q02535 119 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 LINC00473A8K010 186 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 HAPLN4Q86UW8 402 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 OSTCQ9NRP0 149 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 NCR2O95944 276 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 PSG3Q16557 428 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 KIAA1671Q9BY89 1806 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
LRRK1-201ENST00000388948 U3KQA8 63 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms