RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TPM3P06753 285 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 C8GP07360 202 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 COX7CP15954 63 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 C6orf52Q5T4I8 152 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 C22orf39Q6P5X5 142 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR10K1Q8NGX5 313 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 Q8TAT8 98 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 FAM172AQ8WUF8 416 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 CMSS1Q9BQ75 279 aaKnown RBP-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 MED29Q9NX70 200 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 PCTPQ9UKL6 214 aa-0.29□□□□□ -2.46
RNU6-541P-201ENST00000384709 UNC79Q9P2D8 2635 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRGV10A0A0A0MS01 117 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 JMJD7-PLA2G4BH0Y9G9 81 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 H3BRM9 83 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 ERC2-IT1O76042 136 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 IGLV1-51P01701 117 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 CXCL8P10145 99 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 OMPP47874 163 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 SPINT3P49223 89 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 FXYD6P3P58550 94 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 HIST1H3AP68431 136 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 H3F3AP84243 136 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 SPATA45Q537H7 98 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 PDZD9Q8IXQ8 264 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR52L1Q8NGH7 329 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 YPEL2Q96QA6 119 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 HSPB8Q9UJY1 196 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 FBXO5Q9UKT4 447 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 NISCHQ9Y2I1 1504 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 MIA2Q96PC5 1412 aa-0.3□□□□□ -2.46
RNU6-541P-201ENST00000384709 KDM6BO15054 1643 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 NUP210Q8TEM1 1887 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRAV4A0A0B4J268 109 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRBV30A0A0K0K1B3 111 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 C1orf196B1AJZ1 125 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 C5orf67F2Z3F1 127 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 F8W1H4 67 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR7C1O76099 320 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 RANP62826 216 aaKnown RBP-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 EIF5AP63241 154 aaKnown RBP-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 TPM4P67936 248 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 EDDM3AQ14507 147 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 RRN3P1Q2M238 152 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 TEN1Q86WV5 123 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR5AS1Q8N127 324 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR5D14Q8NGL3 314 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR10AG1Q8NH19 301 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 SLC25A40Q8TBP6 338 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 ZNF431Q8TF32 576 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 PBOV1Q9GZY1 135 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 UCK1Q9HA47 277 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 TMEM138Q9NPI0 162 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 LY96Q9Y6Y9 160 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 NCOR1O75376 2440 aa-0.31□□□□□ -2.46
RNU6-541P-201ENST00000384709 C17orf112F2Z3M2 114 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 NDUFB3O43676 98 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 HAND1O96004 215 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 SRP14P37108 136 aaKnown RBP-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 COTL1Q14019 142 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 RNASE7Q9H1E1 156 aaKnown RBP-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 PARVBQ9HBI1 364 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 GLTPQ9NZD2 209 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 FRMPD1Q5SYB0 1578 aa-0.32□□□□□ -2.46
RNU6-541P-201ENST00000384709 ABCA2Q9BZC7 2435 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 NCAPD3P42695 1498 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRBV19A0A075B6N1 114 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 SMIM9A6NGZ8 99 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 A6NN06 94 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 CD2P06729 351 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 SMIM17P0DL12 118 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 PIGPP57054 158 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 RHOBP62745 196 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 KRR1Q13601 381 aaKnown RBP-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 TMEM97Q5BJF2 176 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 C1orf134Q5TEV5 83 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 PATE2Q6UY27 113 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 PRR15Q8IV56 129 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 STAG3L4Q8TBR4 150 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 PLAC4Q8WY50 150 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 MUCL1Q96DR8 90 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 TEX37Q96LM6 180 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 SLC25A21Q9BQT8 299 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 UQCC1Q9NVA1 299 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 RNF11Q9Y3C5 154 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 CCDC144AA2RUR9 1427 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 JMJD1CQ15652 2540 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 USP54Q70EL1 1684 aa-0.33□□□□□ -2.46
RNU6-541P-201ENST00000384709 PLB1Q6P1J6 1458 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 CAMSAP1Q5T5Y3 1602 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 TRAV27A0A087WT01 109 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 PDE6DO43924 150 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 PPYP01298 95 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 CD14P08571 375 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 KDELR1P24390 212 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 QRFPP83859 136 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 CDK6Q00534 326 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 LYRM7Q5U5X0 104 aa-0.34□□□□□ -2.46
RNU6-541P-201ENST00000384709 OR51A2Q8NGJ7 313 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms