RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 IGKV2-40A0A087WW87 121 aaPredicted RBP14.3□□□□□ -0.12
UBL3-201ENST00000380680 NPFFO15130 113 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 NUDT3O95989 172 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 IGKV2D-40P01614 121 aaPredicted RBP14.3□□□□□ -0.12
UBL3-201ENST00000380680 ACTL10Q5JWF8 245 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 ZNF562Q6V9R5 426 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 SLC50A1Q9BRV3 221 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 SNRPD3P62318 126 aaKnown RBP14.3□□□□□ -0.12
UBL3-201ENST00000380680 FAM74A4Q5TZK3 123 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 OR4C46A6NHA9 309 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 HAX1O00165 279 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 SMAD7O15105 426 aaKnown RBP14.29□□□□□ -0.12
UBL3-201ENST00000380680 ORMDL3Q8N138 153 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 A0A1B0GV90 55 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 PAX8Q06710 450 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 MOB4Q9Y3A3 225 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 GGTLC3B5MD39 225 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 H3BUX3 64 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 GLMPQ8WWB7 406 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 C5orf30Q96GV9 206 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 SELENOKQ9Y6D0 94 aa14.29□□□□□ -0.12
UBL3-201ENST00000380680 NDUFS7O75251 213 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 IGFL4Q6B9Z1 124 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 NUP35Q8NFH5 326 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 ZNF329Q86UD4 541 aa14.28□□□□□ -0.12
UBL3-201ENST00000380680 WNK1Q9H4A3 2382 aa14.27□□□□□ -0.12
UBL3-201ENST00000380680 A0A1B0GW15 77 aa14.27□□□□□ -0.12
UBL3-201ENST00000380680 ASCL2Q99929 193 aa14.27□□□□□ -0.12
UBL3-201ENST00000380680 CHD3Q12873 2000 aaKnown RBP14.27□□□□□ -0.12
UBL3-201ENST00000380680 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.12
UBL3-201ENST00000380680 FBLL1A6NHQ2 334 aaKnown RBP14.27□□□□□ -0.12
UBL3-201ENST00000380680 C22orf46C9J442 243 aa14.27□□□□□ -0.12
UBL3-201ENST00000380680 FNDC4Q9H6D8 234 aaPredicted RBP14.27□□□□□ -0.12
UBL3-201ENST00000380680 DYSFO75923 2080 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 IGHV3OR16-12A0A075B7B8 117 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 PRR20EP86478 221 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 PRR20CP86479 221 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 PRR20DP86480 221 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 PRR20BP86481 221 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 PRR20AP86496 221 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 ZNF502Q8TBZ5 544 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 LBHQ53QV2 105 aaPredicted RBP14.27□□□□□ -0.13
UBL3-201ENST00000380680 PMCHL2Q9BQD1 86 aa14.27□□□□□ -0.13
UBL3-201ENST00000380680 Q8TAT8 98 aa14.26□□□□□ -0.13
UBL3-201ENST00000380680 LINC00614P0C842 121 aa14.26□□□□□ -0.13
UBL3-201ENST00000380680 UQCRFS1P47985 274 aa14.26□□□□□ -0.13
UBL3-201ENST00000380680 SRSF9Q13242 221 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBL3-201ENST00000380680 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
UBL3-201ENST00000380680 HERVK_113P61574 105 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 GUSBP1Q15486 140 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 Q1RN00 199 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 OR10J3Q5JRS4 329 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 DDB2Q92466 427 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 A0A1B0GUS0 222 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 ATP5L2Q7Z4Y8 100 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 NIT1Q86X76 327 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 ZNF414Q96IQ9 312 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 A6NDN8 102 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 SYT8Q8NBV8 401 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 SRD5A1P18405 259 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 TSPOP30536 169 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 ASIPP42127 132 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 C12orf54Q6X4T0 127 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 SRSF8Q9BRL6 282 aaKnown RBP14.25□□□□□ -0.13
UBL3-201ENST00000380680 NDUFAF3Q9BU61 184 aa14.25□□□□□ -0.13
UBL3-201ENST00000380680 C7orf71A4D174 169 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 TOMM40O96008 361 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 NDPQ00604 133 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 VWC2Q2TAL6 325 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 FBLN7Q53RD9 439 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 DUX5Q96PT3 197 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 SHANK2-AS3Q9BTD1 123 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 NDUFB8O95169 186 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 NPFFR1Q9GZQ6 430 aa14.24□□□□□ -0.13
UBL3-201ENST00000380680 LSM4Q9Y4Z0 139 aaKnown RBP14.24□□□□□ -0.13
UBL3-201ENST00000380680 B4DSR2 109 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 SNAI2O43623 268 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 SCGB1C2P0DMR2 95 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 NCKAP5O14513 1909 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 RNASE4P34096 147 aaKnown RBP14.23□□□□□ -0.13
UBL3-201ENST00000380680 SLC25A2Q9BXI2 301 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 UBE2E1P51965 193 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 C22orf34Q6ZV56 151 aa14.23□□□□□ -0.13
UBL3-201ENST00000380680 PROP1O75360 226 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 Q8NA96 180 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 FOSL1P15407 271 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 TDGF1P3P51864 188 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 IGFBPL1Q8WX77 278 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 SSBP2P81877 361 aaPredicted RBP14.22□□□□□ -0.13
UBL3-201ENST00000380680 ZNF56Q15929 161 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 C11orf1Q9H5F2 150 aa14.22□□□□□ -0.13
UBL3-201ENST00000380680 G3V318 75 aa14.21□□□□□ -0.13
UBL3-201ENST00000380680 IGHV2-5P01817 119 aa14.21□□□□□ -0.13
UBL3-201ENST00000380680 SIGLEC15Q6ZMC9 328 aa14.21□□□□□ -0.13
UBL3-201ENST00000380680 TEX29Q8N6K0 151 aa14.21□□□□□ -0.13
UBL3-201ENST00000380680 ATP6V0E1O15342 81 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms