RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 C7orf71A4D174 169 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 INS-IGF2F8WCM5 200 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 SLC25A17O43808 307 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 FSTL3O95633 263 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 C16orf97H3BN30 126 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 SNAI2O43623 268 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 ACACAQ13085 2346 aa13.28□□□□□ -0.28
PCDHA1-201ENST00000378133 GAGE10A6NGK3 116 aa13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 CSN3P07498 182 aa13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 IGLC1P0CG04 106 aa13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 ARF6P62330 175 aa13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 CT83Q5H943 113 aa13.27□□□□□ -0.28
PCDHA1-201ENST00000378133 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 NDUFB3O43676 98 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 GNG7O60262 68 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 ORM2P19652 201 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 TMEM186Q96B77 213 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 Q9UFV3 132 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
PCDHA1-201ENST00000378133 A0A1W2PPI3 338 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 C19orf71A6NCJ1 209 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 COX8AP10176 69 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 HCP5Q6MZN7 132 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 BPIFA4PQ86YQ2 179 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 ENSAO43768 121 aaKnown RBP13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 APELAP0DMC3 54 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 FOXE3Q13461 319 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 LINC01545Q5VT33 79 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 STXBP6Q8NFX7 210 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 RBPJQ06330 500 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 FOXC1Q12948 553 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PCDHA1-201ENST00000378133 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 HTR1DP28221 377 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 OR1B1Q8NGR6 318 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 FMC1Q96HJ9 113 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 SELENOKQ9Y6D0 94 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 TPRP12270 2363 aaKnown RBP13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 LTAP01374 205 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 THBDP07204 575 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 TMEM97Q5BJF2 176 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 PERPQ96FX8 193 aa13.25□□□□□ -0.29
PCDHA1-201ENST00000378133 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 SEC11AP67812 179 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 SAMD13Q5VXD3 122 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 NEU4Q8WWR8 484 aaPredicted RBP13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 KLK10O43240 276 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
PCDHA1-201ENST00000378133 H3BTX0 84 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 TNFRSF13BO14836 293 aaPredicted RBP13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 UQCRFS1P47985 274 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 DLX1P56177 255 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 AP1S3Q96PC3 154 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 POLEQ07864 2286 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 COL8A1P27658 744 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 PAX2Q02962 417 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 PRB3Q04118 309 aaPredicted RBP13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 FER1L6-AS1Q8NA97 138 aa13.23□□□□□ -0.29
PCDHA1-201ENST00000378133 HAX1O00165 279 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 TCRAP04437 139 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 GTF2H5Q6ZYL4 71 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 AP5S1Q9NUS5 200 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 G3V4G9 280 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 PRRG2O14669 202 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 PPIAL4GP0DN37 164 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 ZNF747Q9BV97 191 aa13.22□□□□□ -0.29
PCDHA1-201ENST00000378133 SPTBN2O15020 2390 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 CNTFRP26992 372 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 DLX6P56179 175 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 TEX45Q8NA69 505 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 Q9H3A6 140 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 IGHV1-8P0DP01 117 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 MC5RP33032 325 aa13.21□□□□□ -0.29
PCDHA1-201ENST00000378133 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms