RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 C1orf122Q6ZSJ8 110 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 NDUFB8O95169 186 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 IZUMO1RA6ND01 250 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 C9JCJ5 164 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 TCRAP04437 139 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 SELENOKQ9Y6D0 94 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 TRBV24-1A0A075B6N3 115 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 FBLL1A6NHQ2 334 aaKnown RBP11.61□□□□□ -0.55
TCOF1-202ENST00000377797 TMEM183AQ8IXX5 376 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 FABP5P3A8MUU1 101 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 TOMM40O96008 361 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 GLMPQ8WWB7 406 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
TCOF1-202ENST00000377797 COL5A1P20908 1838 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-202ENST00000377797 NCKAP5O14513 1909 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 SRD5A1P18405 259 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 NDPQ00604 133 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 PRORYQ9H606 182 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 HIVEP3Q5T1R4 2406 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 M0R381 172 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 M0R3E3 92 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
TCOF1-202ENST00000377797 PF4P02776 101 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 IGHV4-61A0A0C4DH41 118 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 SIGLEC15Q6ZMC9 328 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 FNDC4Q9H6D8 234 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-202ENST00000377797 DTX2Q86UW9 622 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 NUDT10Q8NFP7 164 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-202ENST00000377797 MYOZ3Q8TDC0 251 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 NUDT11Q96G61 164 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-202ENST00000377797 J3QKU1 62 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-202ENST00000377797 SYT8Q8NBV8 401 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
TCOF1-202ENST00000377797 Q6AWC8 147 aa11.58□□□□□ -0.55
TCOF1-202ENST00000377797 IGLC7A0M8Q6 106 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 A6NDN8 102 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
TCOF1-202ENST00000377797 USMG5Q96IX5 58 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 Q96MF0 132 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-202ENST00000377797 ZFYVE26Q68DK2 2539 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 ASCL2Q99929 193 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-202ENST00000377797 ARHGAP21Q5T5U3 1957 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 K7ERU9 68 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 PROP1O75360 226 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 DSCAMO60469 2012 aa11.58□□□□□ -0.56
TCOF1-202ENST00000377797 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 DAZAP2Q15038 168 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-202ENST00000377797 HOXA5P20719 270 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 IGFL4Q6B9Z1 124 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 PLXNB1O43157 2135 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 CGB3P0DN86 165 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 CGB7P0DN87 165 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 AP5S1Q9NUS5 200 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 PEMTQ9UBM1 199 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 TRBV20OR9-2A0A075B6H5 130 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-202ENST00000377797 FAM120AOSQ5T036 256 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 NAV3Q8IVL0 2385 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 HIVEP2P31629 2446 aa11.57□□□□□ -0.56
TCOF1-202ENST00000377797 USP9YO00507 2555 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-202ENST00000377797 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-202ENST00000377797 FOXL1Q12952 345 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 SAMD13Q5VXD3 122 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 ODF3L1Q8IXM7 274 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms